Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC01796-201ENST00000611915 709 ntTSL 3 BASIC9.65□□□□□ -0.86
MTHFRP42898 uc_338.33-201ENST00000614988 170 ntBASIC9.65□□□□□ -0.86
MTHFRP42898 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC9.65□□□□□ -0.86
MTHFRP42898 FAM238C-205ENST00000640641 391 ntBASIC9.65□□□□□ -0.86
MTHFRP42898 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
MTHFRP42898 CU634019.1-201ENST00000623095 2247 ntTSL 2 BASIC9.65□□□□□ -0.86
MTHFRP42898 CU633904.1-202ENST00000625096 2247 ntTSL 2 BASIC9.65□□□□□ -0.86
MTHFRP42898 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
MTHFRP42898 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC9.65□□□□□ -0.86
MTHFRP42898 C1QTNF3-AMACR-201ENST00000382079 3424 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
MTHFRP42898 AC090616.7-201ENST00000625123 2179 ntBASIC9.65□□□□□ -0.86
MTHFRP42898 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC9.65□□□□□ -0.86
MTHFRP42898 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC9.65□□□□□ -0.86
MTHFRP42898 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
MTHFRP42898 PRPF38B-203ENST00000370025 3693 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
MTHFRP42898 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
MTHFRP42898 TNFSF11-204ENST00000405262 2135 ntTSL 5 BASIC9.65□□□□□ -0.86
MTHFRP42898 ZNF615-202ENST00000391795 2698 ntTSL 2 BASIC9.65□□□□□ -0.87
MTHFRP42898 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
MTHFRP42898 ZNF766-206ENST00000599581 2065 ntTSL 2 BASIC9.65□□□□□ -0.87
MTHFRP42898 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
MTHFRP42898 KCNE1-208ENST00000611936 3222 ntAPPRIS P1 TSL 4 BASIC9.65□□□□□ -0.87
MTHFRP42898 PREPL-202ENST00000378511 2315 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
MTHFRP42898 MAPK10-375ENST00000641989 2331 ntBASIC9.65□□□□□ -0.87
MTHFRP42898 CBWD1-204ENST00000377447 2513 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 FAM149B1P1-201ENST00000533428 1610 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 ERCC5-202ENST00000375954 2986 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 IL17A-201ENST00000340057 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 SLC22A2-201ENST00000366952 3737 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 SLMAP-219ENST00000494088 1305 ntTSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 CAMSAP2-203ENST00000413307 4498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 RTTN-202ENST00000578780 2333 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 RCAN1-207ENST00000481448 2816 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 ZNF860-201ENST00000360311 3098 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 ZBTB20-202ENST00000393785 3323 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 AL589763.1-201ENST00000412257 791 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 OR51R1P-201ENST00000435309 952 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 CYP2C58P-201ENST00000436281 475 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 AC006463.1-201ENST00000445929 232 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 LINC01696-201ENST00000448988 492 ntTSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 AC020658.1-201ENST00000471253 938 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 RN7SL156P-201ENST00000480334 304 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 AC114786.3-201ENST00000509304 705 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC9.64□□□□□ -0.87
MTHFRP42898 OR2AL1P-201ENST00000529862 507 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC9.64□□□□□ -0.87
MTHFRP42898 AC138466.2-201ENST00000540993 304 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 TRIM16-214ENST00000579219 999 ntTSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC9.64□□□□□ -0.87
MTHFRP42898 MIR4435-2HG-217ENST00000604981 759 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 LINC00266-4P-202ENST00000611754 723 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 AC005796.1-201ENST00000623214 433 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 PRAMEF33-201ENST00000437300 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 AC108120.3-201ENST00000505953 1510 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 HENMT1-201ENST00000370031 1717 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 AP3B2-209ENST00000542200 3921 ntTSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 AP001425.1-201ENST00000632732 1940 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
MTHFRP42898 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 LINC01354-202ENST00000435574 2860 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 CD44-206ENST00000415148 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 AC008663.2-202ENST00000519897 1418 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 ANKRD55-203ENST00000504958 2139 ntTSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 AC090241.3-201ENST00000621730 2599 ntBASIC9.64□□□□□ -0.87
MTHFRP42898 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
MTHFRP42898 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
MTHFRP42898 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
MTHFRP42898 AC005176.1-201ENST00000594263 1831 ntTSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 AL135903.1-201ENST00000402742 1590 ntBASIC9.63□□□□□ -0.87
MTHFRP42898 CRX-201ENST00000221996 4470 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 COA7-201ENST00000371538 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
MTHFRP42898 NCF2-202ENST00000367536 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 BICC1-201ENST00000263103 1763 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 KCNT2-201ENST00000294725 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
MTHFRP42898 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 GUCY1A3-204ENST00000455639 2631 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
MTHFRP42898 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms