Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
BIVM-ERCC5R4GMW8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 HES2-206ENST00000489730 730 ntTSL 2 BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 RARRES2P10-201ENST00000564312 460 ntBASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 AC120498.8-201ENST00000614275 531 ntBASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
BIVM-ERCC5R4GMW8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC34.51■■■■□ 3.12
BIVM-ERCC5R4GMW8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC34.51■■■■□ 3.12
BIVM-ERCC5R4GMW8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
BIVM-ERCC5R4GMW8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
BIVM-ERCC5R4GMW8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
BIVM-ERCC5R4GMW8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
BIVM-ERCC5R4GMW8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
BIVM-ERCC5R4GMW8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC34.51■■■■□ 3.11
BIVM-ERCC5R4GMW8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC34.51■■■■□ 3.11
BIVM-ERCC5R4GMW8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC34.51■■■■□ 3.11
BIVM-ERCC5R4GMW8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
BIVM-ERCC5R4GMW8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 AC012306.2-201ENST00000609350 630 ntBASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 AC110285.5-201ENST00000611501 352 ntBASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
BIVM-ERCC5R4GMW8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 PENK-204ENST00000518770 863 ntTSL 2 BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
BIVM-ERCC5R4GMW8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 Six3os1_6.1-201ENST00000620790 196 ntBASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
BIVM-ERCC5R4GMW8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC34.46■■■■□ 3.11
BIVM-ERCC5R4GMW8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC34.46■■■■□ 3.11
BIVM-ERCC5R4GMW8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
BIVM-ERCC5R4GMW8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
BIVM-ERCC5R4GMW8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC34.46■■■■□ 3.11
BIVM-ERCC5R4GMW8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC34.46■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms