Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 AL024507.2-201ENST00000606070 2574 ntBASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00588Q9Y4M8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 AC087633.2-202ENST00000565166 1439 ntBASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 PGM5P4-201ENST00000421970 445 ntBASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 AC011484.1-201ENST00000377652 1995 ntBASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.07□□□□□ -0.16
LINC00588Q9Y4M8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LINC00588Q9Y4M8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 AL049796.1-201ENST00000565336 1766 ntBASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 ESRRAP1-201ENST00000400596 1257 ntBASIC14.05□□□□□ -0.16
LINC00588Q9Y4M8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms