Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AL358852.1-201ENST00000623174 1268 ntBASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHMP2BQ9UQN3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 RARRES2P11-201ENST00000635158 484 ntBASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 AC099778.1-201ENST00000568593 1911 ntBASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHMP2BQ9UQN3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHMP2BQ9UQN3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP2BQ9UQN3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP2BQ9UQN3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP2BQ9UQN3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP2BQ9UQN3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.83■□□□□ 0.92
CHMP2BQ9UQN3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHMP2BQ9UQN3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.83■□□□□ 0.92
CHMP2BQ9UQN3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CHMP2BQ9UQN3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CHMP2BQ9UQN3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 AC142381.2-201ENST00000566120 298 ntBASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CHMP2BQ9UQN3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 AL139246.5-201ENST00000606645 996 ntBASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHMP2BQ9UQN3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.8■□□□□ 0.92
CHMP2BQ9UQN3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms