Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LRIT1Q9P2V4 LINC00565-201ENST00000562710 2331 ntBASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRIT1Q9P2V4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 AC087633.2-202ENST00000565166 1439 ntBASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.87■□□□□ 0.77
LRIT1Q9P2V4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 KRT17P3-201ENST00000420566 1262 ntBASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 PGM5P4-201ENST00000421970 445 ntBASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 C2orf69P4-201ENST00000565394 541 ntBASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRIT1Q9P2V4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 SOX15-203ENST00000570788 1093 ntBASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.85■□□□□ 0.77
LRIT1Q9P2V4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.84■□□□□ 0.77
LRIT1Q9P2V4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms