Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.59■□□□□ 0.89
CPSF2Q9P2I0 BX005040.4-201ENST00000637145 1518 ntBASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 AL355001.2-201ENST00000620617 1191 ntBASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPSF2Q9P2I0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.58■□□□□ 0.88
CPSF2Q9P2I0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.58■□□□□ 0.88
CPSF2Q9P2I0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPSF2Q9P2I0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 RASA4CP-201ENST00000424092 1398 ntBASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPSF2Q9P2I0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 GABARAPL3-202ENST00000624044 1851 ntBASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 MIR572-201ENST00000384983 95 ntBASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 MIR939-201ENST00000401314 82 ntBASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 LETM1P2-201ENST00000597330 2178 ntBASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPSF2Q9P2I0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CPSF2Q9P2I0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 AC091305.1-201ENST00000479476 895 ntBASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms