Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THUMPD1Q9NXG2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 AC010141.2-201ENST00000452426 721 ntBASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 AC105265.2-201ENST00000467189 838 ntBASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
THUMPD1Q9NXG2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 FP700111.2-201ENST00000619190 1892 ntBASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THUMPD1Q9NXG2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 AC123595.1-201ENST00000440769 1046 ntBASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 DUX4L2-201ENST00000561772 1275 ntBASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 DUX4L6-201ENST00000626483 1275 ntBASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 DUX4L1-201ENST00000627662 1275 ntBASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 DUX4L8-201ENST00000629013 1275 ntBASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 DUX4L3-201ENST00000630187 1275 ntBASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 DUX4L7-201ENST00000630678 1275 ntBASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 DUX4L5-201ENST00000630834 1275 ntBASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THUMPD1Q9NXG2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 KRT18P20-201ENST00000548986 1279 ntBASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 RARRES2P11-201ENST00000635158 484 ntBASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
THUMPD1Q9NXG2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms