Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19■□□□□ 0.63
HPF1Q9NWY4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19■□□□□ 0.63
HPF1Q9NWY4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19■□□□□ 0.63
HPF1Q9NWY4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19■□□□□ 0.63
HPF1Q9NWY4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19■□□□□ 0.63
HPF1Q9NWY4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPF1Q9NWY4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HPF1Q9NWY4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 AC100791.3-201ENST00000617619 330 ntBASIC18.99■□□□□ 0.63
HPF1Q9NWY4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 Z98882.1-201ENST00000622160 2253 ntBASIC18.99■□□□□ 0.63
HPF1Q9NWY4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HPF1Q9NWY4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.98■□□□□ 0.63
HPF1Q9NWY4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 AC092118.2-201ENST00000613495 667 ntBASIC18.98■□□□□ 0.63
HPF1Q9NWY4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.98■□□□□ 0.63
HPF1Q9NWY4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 LSM12P1-201ENST00000411836 588 ntBASIC18.97■□□□□ 0.63
HPF1Q9NWY4 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.97■□□□□ 0.63
HPF1Q9NWY4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 AC098934.4-201ENST00000564127 592 ntBASIC18.97■□□□□ 0.63
HPF1Q9NWY4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HPF1Q9NWY4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 MCRIP2P1-201ENST00000394346 511 ntBASIC18.96■□□□□ 0.63
HPF1Q9NWY4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HPF1Q9NWY4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HPF1Q9NWY4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms