Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS45Q9NRW7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS45Q9NRW7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
VPS45Q9NRW7 AC093787.1-201ENST00000450396 207 ntBASIC21.16■□□□□ 0.98
VPS45Q9NRW7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.16■□□□□ 0.98
VPS45Q9NRW7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS45Q9NRW7 AC083880.1-201ENST00000608266 535 ntBASIC21.16■□□□□ 0.98
VPS45Q9NRW7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VPS45Q9NRW7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
VPS45Q9NRW7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VPS45Q9NRW7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.16■□□□□ 0.98
VPS45Q9NRW7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 AC006058.3-201ENST00000606217 1069 ntBASIC21.15■□□□□ 0.98
VPS45Q9NRW7 AC016405.3-201ENST00000607710 860 ntBASIC21.15■□□□□ 0.98
VPS45Q9NRW7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS45Q9NRW7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VPS45Q9NRW7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VPS45Q9NRW7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VPS45Q9NRW7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VPS45Q9NRW7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VPS45Q9NRW7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.14■□□□□ 0.97
VPS45Q9NRW7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS45Q9NRW7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.14■□□□□ 0.97
VPS45Q9NRW7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
VPS45Q9NRW7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
VPS45Q9NRW7 MYC-209ENST00000641252 345 ntBASIC21.14■□□□□ 0.97
VPS45Q9NRW7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.14■□□□□ 0.97
VPS45Q9NRW7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 AC128676.1-201ENST00000454392 318 ntBASIC21.13■□□□□ 0.97
VPS45Q9NRW7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS45Q9NRW7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.12■□□□□ 0.97
VPS45Q9NRW7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
VPS45Q9NRW7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 AL121603.2-201ENST00000557373 2117 ntBASIC21.1■□□□□ 0.97
VPS45Q9NRW7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 UNC93B4-201ENST00000505679 747 ntBASIC21.1■□□□□ 0.97
VPS45Q9NRW7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS45Q9NRW7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms