Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM9Q9NQV7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 AL512625.2-201ENST00000417533 625 ntBASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.38■□□□□ 0.69
PRDM9Q9NQV7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 HLA-L-209ENST00000420110 1011 ntBASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 AL109923.1-201ENST00000618799 583 ntBASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM9Q9NQV7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRDM9Q9NQV7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 SLC29A4P1-201ENST00000398760 971 ntBASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 TSPY6P-201ENST00000448518 926 ntBASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 AC093787.1-201ENST00000450396 207 ntBASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 AC104771.1-201ENST00000603335 964 ntBASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 AC007225.1-201ENST00000566331 1836 ntBASIC19.35■□□□□ 0.69
PRDM9Q9NQV7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.34■□□□□ 0.69
PRDM9Q9NQV7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms