Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.51■□□□□ 0.55
HINT3Q9NQE9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HINT3Q9NQE9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.5■□□□□ 0.55
HINT3Q9NQE9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 AC123595.1-201ENST00000440769 1046 ntBASIC18.5■□□□□ 0.55
HINT3Q9NQE9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.5■□□□□ 0.55
HINT3Q9NQE9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 AC087623.3-201ENST00000607047 1098 ntBASIC18.49■□□□□ 0.55
HINT3Q9NQE9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.49■□□□□ 0.55
HINT3Q9NQE9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.48■□□□□ 0.55
HINT3Q9NQE9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HINT3Q9NQE9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HINT3Q9NQE9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HINT3Q9NQE9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HINT3Q9NQE9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HINT3Q9NQE9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.46■□□□□ 0.55
HINT3Q9NQE9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms