Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
ZFYVE28Q9HCC9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
ZFYVE28Q9HCC9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
ZFYVE28Q9HCC9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 AF186192.3-201ENST00000583427 947 ntBASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 AC005363.2-201ENST00000618631 242 ntBASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
ZFYVE28Q9HCC9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ZFYVE28Q9HCC9 HTR7P1-201ENST00000538670 1336 ntBASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 AC145285.6-201ENST00000604632 637 ntBASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 MIR6786-201ENST00000616843 113 ntBASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
ZFYVE28Q9HCC9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ZFYVE28Q9HCC9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
ZFYVE28Q9HCC9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.58■■□□□ 1.37
ZFYVE28Q9HCC9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.58■■□□□ 1.37
ZFYVE28Q9HCC9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ZFYVE28Q9HCC9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ZFYVE28Q9HCC9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
ZFYVE28Q9HCC9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.58■■□□□ 1.36
ZFYVE28Q9HCC9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.58■■□□□ 1.36
ZFYVE28Q9HCC9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.58■■□□□ 1.36
ZFYVE28Q9HCC9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms