Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIF1Q9H611 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PIF1Q9H611 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.54■□□□□ 0.72
PIF1Q9H611 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PIF1Q9H611 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIF1Q9H611 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PIF1Q9H611 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIF1Q9H611 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.54■□□□□ 0.72
PIF1Q9H611 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PIF1Q9H611 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
PIF1Q9H611 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PIF1Q9H611 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PIF1Q9H611 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIF1Q9H611 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIF1Q9H611 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIF1Q9H611 BX005040.4-201ENST00000637145 1518 ntBASIC19.53■□□□□ 0.72
PIF1Q9H611 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
PIF1Q9H611 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.53■□□□□ 0.72
PIF1Q9H611 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIF1Q9H611 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIF1Q9H611 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIF1Q9H611 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PIF1Q9H611 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PIF1Q9H611 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PIF1Q9H611 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PIF1Q9H611 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PIF1Q9H611 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIF1Q9H611 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PIF1Q9H611 AC099778.1-201ENST00000568593 1911 ntBASIC19.53■□□□□ 0.72
PIF1Q9H611 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PIF1Q9H611 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PIF1Q9H611 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PIF1Q9H611 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.52■□□□□ 0.72
PIF1Q9H611 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PIF1Q9H611 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PIF1Q9H611 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PIF1Q9H611 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PIF1Q9H611 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.52■□□□□ 0.72
PIF1Q9H611 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.52■□□□□ 0.72
PIF1Q9H611 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.52■□□□□ 0.72
PIF1Q9H611 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.52■□□□□ 0.72
PIF1Q9H611 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.52■□□□□ 0.72
PIF1Q9H611 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.52■□□□□ 0.72
PIF1Q9H611 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PIF1Q9H611 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PIF1Q9H611 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PIF1Q9H611 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PIF1Q9H611 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PIF1Q9H611 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PIF1Q9H611 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.52■□□□□ 0.71
PIF1Q9H611 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
PIF1Q9H611 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.52■□□□□ 0.71
PIF1Q9H611 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PIF1Q9H611 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PIF1Q9H611 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PIF1Q9H611 AC087289.5-201ENST00000586076 3175 ntBASIC19.51■□□□□ 0.71
PIF1Q9H611 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.51■□□□□ 0.71
PIF1Q9H611 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PIF1Q9H611 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PIF1Q9H611 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 IGHV3-19-201ENST00000521488 291 ntBASIC19.51■□□□□ 0.71
PIF1Q9H611 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PIF1Q9H611 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.51■□□□□ 0.71
PIF1Q9H611 AC027682.1-201ENST00000562846 899 ntBASIC19.51■□□□□ 0.71
PIF1Q9H611 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.51■□□□□ 0.71
PIF1Q9H611 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.51■□□□□ 0.71
PIF1Q9H611 AC005224.4-201ENST00000583262 1652 ntBASIC19.51■□□□□ 0.71
PIF1Q9H611 AL162377.1-201ENST00000618844 1793 ntBASIC19.51■□□□□ 0.71
PIF1Q9H611 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PIF1Q9H611 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.51■□□□□ 0.71
PIF1Q9H611 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PIF1Q9H611 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PIF1Q9H611 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PIF1Q9H611 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.5■□□□□ 0.71
PIF1Q9H611 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PIF1Q9H611 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PIF1Q9H611 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PIF1Q9H611 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.5■□□□□ 0.71
PIF1Q9H611 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PIF1Q9H611 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.5■□□□□ 0.71
PIF1Q9H611 AC008764.7-201ENST00000593779 1081 ntBASIC19.5■□□□□ 0.71
PIF1Q9H611 AC105233.4-201ENST00000642045 216 ntBASIC19.5■□□□□ 0.71
PIF1Q9H611 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.5■□□□□ 0.71
PIF1Q9H611 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PIF1Q9H611 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PIF1Q9H611 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PIF1Q9H611 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.49■□□□□ 0.71
PIF1Q9H611 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
PIF1Q9H611 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms