Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 LETM1P2-201ENST00000597330 2178 ntBASIC22.4■■□□□ 1.18
KCNF1Q9H3M0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
KCNF1Q9H3M0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNF1Q9H3M0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KCNF1Q9H3M0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KCNF1Q9H3M0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNF1Q9H3M0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNF1Q9H3M0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNF1Q9H3M0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNF1Q9H3M0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 TSPY9P-201ENST00000440215 945 ntBASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 TSPY11P-201ENST00000442607 1045 ntBASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 KRT125P-201ENST00000546827 989 ntBASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNF1Q9H3M0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
KCNF1Q9H3M0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
KCNF1Q9H3M0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.36■■□□□ 1.17
KCNF1Q9H3M0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
KCNF1Q9H3M0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
KCNF1Q9H3M0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms