Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NKX6-2Q9C056 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.58■□□□□ 0.25
NKX6-2Q9C056 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.58■□□□□ 0.25
NKX6-2Q9C056 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 PCDHB18P-201ENST00000524813 2368 ntBASIC16.58■□□□□ 0.24
NKX6-2Q9C056 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NKX6-2Q9C056 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 AC104564.3-201ENST00000582367 638 ntBASIC16.57■□□□□ 0.24
NKX6-2Q9C056 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 AP000997.3-201ENST00000623333 2250 ntBASIC16.57■□□□□ 0.24
NKX6-2Q9C056 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NKX6-2Q9C056 AC099778.1-201ENST00000568593 1911 ntBASIC16.57■□□□□ 0.24
NKX6-2Q9C056 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 AL133373.2-201ENST00000623187 2828 ntBASIC16.56■□□□□ 0.24
NKX6-2Q9C056 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NKX6-2Q9C056 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 AC005703.6-201ENST00000623265 1329 ntBASIC16.55■□□□□ 0.24
NKX6-2Q9C056 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 SNX5-217ENST00000606557 1087 ntBASIC16.55■□□□□ 0.24
NKX6-2Q9C056 AL162377.1-201ENST00000618844 1793 ntBASIC16.55■□□□□ 0.24
NKX6-2Q9C056 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NKX6-2Q9C056 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms