Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.34■□□□□ 0.37
FOXC2Q99958 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXC2Q99958 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
FOXC2Q99958 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXC2Q99958 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXC2Q99958 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXC2Q99958 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXC2Q99958 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.33■□□□□ 0.37
FOXC2Q99958 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXC2Q99958 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.33■□□□□ 0.37
FOXC2Q99958 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXC2Q99958 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXC2Q99958 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXC2Q99958 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.33■□□□□ 0.36
FOXC2Q99958 AC005829.2-201ENST00000571422 1056 ntBASIC17.33■□□□□ 0.36
FOXC2Q99958 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.33■□□□□ 0.36
FOXC2Q99958 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.33■□□□□ 0.36
FOXC2Q99958 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXC2Q99958 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXC2Q99958 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXC2Q99958 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXC2Q99958 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXC2Q99958 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXC2Q99958 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXC2Q99958 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXC2Q99958 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXC2Q99958 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 AC137767.1-201ENST00000602918 1920 ntBASIC17.32■□□□□ 0.36
FOXC2Q99958 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXC2Q99958 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXC2Q99958 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXC2Q99958 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXC2Q99958 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
FOXC2Q99958 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXC2Q99958 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
FOXC2Q99958 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FOXC2Q99958 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXC2Q99958 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXC2Q99958 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FOXC2Q99958 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXC2Q99958 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
FOXC2Q99958 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXC2Q99958 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXC2Q99958 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXC2Q99958 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXC2Q99958 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FOXC2Q99958 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXC2Q99958 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
FOXC2Q99958 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXC2Q99958 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXC2Q99958 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXC2Q99958 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
FOXC2Q99958 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.31■□□□□ 0.36
FOXC2Q99958 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXC2Q99958 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FOXC2Q99958 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.31■□□□□ 0.36
FOXC2Q99958 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 AC003102.1-202ENST00000563394 1796 ntBASIC17.3■□□□□ 0.36
FOXC2Q99958 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.3■□□□□ 0.36
FOXC2Q99958 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXC2Q99958 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXC2Q99958 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXC2Q99958 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXC2Q99958 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXC2Q99958 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.3■□□□□ 0.36
FOXC2Q99958 MIR6786-201ENST00000616843 113 ntBASIC17.3■□□□□ 0.36
FOXC2Q99958 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
FOXC2Q99958 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXC2Q99958 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXC2Q99958 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXC2Q99958 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXC2Q99958 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXC2Q99958 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.29■□□□□ 0.36
FOXC2Q99958 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXC2Q99958 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXC2Q99958 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FOXC2Q99958 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXC2Q99958 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXC2Q99958 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms