Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS2Q99743 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
NPAS2Q99743 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS2Q99743 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.02■□□□□ 0.8
NPAS2Q99743 AC020907.5-201ENST00000624372 1936 ntBASIC20.02■□□□□ 0.8
NPAS2Q99743 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS2Q99743 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS2Q99743 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS2Q99743 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.02■□□□□ 0.8
NPAS2Q99743 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NPAS2Q99743 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.02■□□□□ 0.8
NPAS2Q99743 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
NPAS2Q99743 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NPAS2Q99743 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS2Q99743 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.02■□□□□ 0.79
NPAS2Q99743 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
NPAS2Q99743 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.02■□□□□ 0.79
NPAS2Q99743 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NPAS2Q99743 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.02■□□□□ 0.79
NPAS2Q99743 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.02■□□□□ 0.79
NPAS2Q99743 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
NPAS2Q99743 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NPAS2Q99743 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NPAS2Q99743 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS2Q99743 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS2Q99743 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.01■□□□□ 0.79
NPAS2Q99743 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.01■□□□□ 0.79
NPAS2Q99743 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS2Q99743 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.01■□□□□ 0.79
NPAS2Q99743 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS2Q99743 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS2Q99743 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS2Q99743 AC007225.1-201ENST00000566331 1836 ntBASIC20.01■□□□□ 0.79
NPAS2Q99743 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NPAS2Q99743 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20■□□□□ 0.79
NPAS2Q99743 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20■□□□□ 0.79
NPAS2Q99743 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS2Q99743 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20■□□□□ 0.79
NPAS2Q99743 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20■□□□□ 0.79
NPAS2Q99743 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS2Q99743 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS2Q99743 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS2Q99743 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS2Q99743 GXYLT1P2-201ENST00000433312 1230 ntBASIC20■□□□□ 0.79
NPAS2Q99743 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20■□□□□ 0.79
NPAS2Q99743 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NPAS2Q99743 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
NPAS2Q99743 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20■□□□□ 0.79
NPAS2Q99743 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NPAS2Q99743 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS2Q99743 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NPAS2Q99743 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NPAS2Q99743 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.99■□□□□ 0.79
NPAS2Q99743 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS2Q99743 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.99■□□□□ 0.79
NPAS2Q99743 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.99■□□□□ 0.79
NPAS2Q99743 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.99■□□□□ 0.79
NPAS2Q99743 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NPAS2Q99743 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.99■□□□□ 0.79
NPAS2Q99743 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.99■□□□□ 0.79
NPAS2Q99743 AL137784.2-201ENST00000607332 1000 ntBASIC19.99■□□□□ 0.79
NPAS2Q99743 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.99■□□□□ 0.79
NPAS2Q99743 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPAS2Q99743 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS2Q99743 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.99■□□□□ 0.79
NPAS2Q99743 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS2Q99743 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS2Q99743 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.99■□□□□ 0.79
NPAS2Q99743 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS2Q99743 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS2Q99743 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NPAS2Q99743 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NPAS2Q99743 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NPAS2Q99743 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS2Q99743 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS2Q99743 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS2Q99743 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS2Q99743 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS2Q99743 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS2Q99743 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NPAS2Q99743 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS2Q99743 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
NPAS2Q99743 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS2Q99743 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NPAS2Q99743 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.98■□□□□ 0.79
NPAS2Q99743 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS2Q99743 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NPAS2Q99743 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.98■□□□□ 0.79
NPAS2Q99743 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.98■□□□□ 0.79
NPAS2Q99743 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS2Q99743 AC004854.2-201ENST00000608450 1441 ntBASIC19.98■□□□□ 0.79
NPAS2Q99743 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NPAS2Q99743 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NPAS2Q99743 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.98■□□□□ 0.79
NPAS2Q99743 AP004607.4-201ENST00000530158 1459 ntBASIC19.98■□□□□ 0.79
NPAS2Q99743 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NPAS2Q99743 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS2Q99743 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.97■□□□□ 0.79
NPAS2Q99743 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms