Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC010203.1-204ENST00000548782 407 ntBASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 PVRIG2P-201ENST00000435460 978 ntBASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 AP003733.4-201ENST00000623785 1697 ntBASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNTNAP3BQ96NU0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP3BQ96NU0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP3BQ96NU0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNTNAP3BQ96NU0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 FAM197Y1-201ENST00000421178 764 ntBASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 KRT16P2-201ENST00000414673 1423 ntBASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 AC087633.2-202ENST00000565166 1439 ntBASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNTNAP3BQ96NU0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 AF186192.3-201ENST00000583427 947 ntBASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 FAM21FP-204ENST00000608637 956 ntBASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 AC010947.1-201ENST00000623454 693 ntBASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNTNAP3BQ96NU0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 LIN28AP1-201ENST00000429574 405 ntBASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 AC022616.7-201ENST00000525383 220 ntBASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 AC004263.2-201ENST00000617183 678 ntBASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 AP000550.4-202ENST00000639755 178 ntBASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNTNAP3BQ96NU0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.61■□□□□ 0.73
CNTNAP3BQ96NU0 MCRIP2P1-201ENST00000394346 511 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms