Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ZNF48Q96MX3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 AC007375.3-201ENST00000600936 2314 ntBASIC16.69■□□□□ 0.26
ZNF48Q96MX3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 AC142381.4-202ENST00000563973 229 ntBASIC16.69■□□□□ 0.26
ZNF48Q96MX3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 AC073648.6-201ENST00000641589 218 ntBASIC16.69■□□□□ 0.26
ZNF48Q96MX3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZNF48Q96MX3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 MCRIP2P1-201ENST00000394346 511 ntBASIC16.68■□□□□ 0.26
ZNF48Q96MX3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ZNF48Q96MX3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 AC007322.3-201ENST00000426526 701 ntBASIC16.67■□□□□ 0.26
ZNF48Q96MX3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 AC008403.3-201ENST00000598924 454 ntBASIC16.67■□□□□ 0.26
ZNF48Q96MX3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 AL589743.5-201ENST00000616611 1050 ntBASIC16.67■□□□□ 0.26
ZNF48Q96MX3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 AC026310.3-201ENST00000625186 2373 ntBASIC16.67■□□□□ 0.26
ZNF48Q96MX3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF48Q96MX3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.66■□□□□ 0.26
ZNF48Q96MX3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 AC060766.5-201ENST00000590539 871 ntBASIC16.66■□□□□ 0.26
ZNF48Q96MX3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF48Q96MX3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 KRT18P68-201ENST00000392293 1000 ntBASIC16.65■□□□□ 0.26
ZNF48Q96MX3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF48Q96MX3 HLA-B-256ENST00000639848 1089 ntBASIC16.65■□□□□ 0.26
ZNF48Q96MX3 AP006294.2-201ENST00000641667 209 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms