Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.67■■□□□ 1.06
CALR3Q96L12 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.67■■□□□ 1.06
CALR3Q96L12 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.67■■□□□ 1.06
CALR3Q96L12 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CALR3Q96L12 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.67■■□□□ 1.06
CALR3Q96L12 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CALR3Q96L12 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CALR3Q96L12 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CALR3Q96L12 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.67■■□□□ 1.06
CALR3Q96L12 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 AC116050.2-201ENST00000612102 1779 ntBASIC21.66■■□□□ 1.06
CALR3Q96L12 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.66■■□□□ 1.06
CALR3Q96L12 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CALR3Q96L12 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CALR3Q96L12 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.66■■□□□ 1.06
CALR3Q96L12 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CALR3Q96L12 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CALR3Q96L12 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.66■■□□□ 1.06
CALR3Q96L12 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.66■■□□□ 1.06
CALR3Q96L12 AC010141.2-201ENST00000452426 721 ntBASIC21.66■■□□□ 1.06
CALR3Q96L12 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.66■■□□□ 1.06
CALR3Q96L12 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.66■■□□□ 1.06
CALR3Q96L12 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CALR3Q96L12 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CALR3Q96L12 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CALR3Q96L12 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CALR3Q96L12 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.65■■□□□ 1.06
CALR3Q96L12 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CALR3Q96L12 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CALR3Q96L12 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CALR3Q96L12 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.65■■□□□ 1.06
CALR3Q96L12 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CALR3Q96L12 MIR2861-201ENST00000636310 90 ntBASIC21.65■■□□□ 1.06
CALR3Q96L12 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CALR3Q96L12 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CALR3Q96L12 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CALR3Q96L12 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.65■■□□□ 1.06
CALR3Q96L12 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CALR3Q96L12 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.65■■□□□ 1.06
CALR3Q96L12 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CALR3Q96L12 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CALR3Q96L12 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CALR3Q96L12 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CALR3Q96L12 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CALR3Q96L12 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CALR3Q96L12 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CALR3Q96L12 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CALR3Q96L12 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.64■■□□□ 1.05
CALR3Q96L12 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.64■■□□□ 1.05
CALR3Q96L12 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CALR3Q96L12 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CALR3Q96L12 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CALR3Q96L12 AC027612.3-201ENST00000413684 1047 ntBASIC21.64■■□□□ 1.05
CALR3Q96L12 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.64■■□□□ 1.05
CALR3Q96L12 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.64■■□□□ 1.05
CALR3Q96L12 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CALR3Q96L12 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.64■■□□□ 1.05
CALR3Q96L12 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CALR3Q96L12 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CALR3Q96L12 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.63■■□□□ 1.05
CALR3Q96L12 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 IRS3P-201ENST00000223076 1006 ntBASIC21.63■■□□□ 1.05
CALR3Q96L12 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.63■■□□□ 1.05
CALR3Q96L12 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.63■■□□□ 1.05
CALR3Q96L12 KRT18P20-201ENST00000548986 1279 ntBASIC21.63■■□□□ 1.05
CALR3Q96L12 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.63■■□□□ 1.05
CALR3Q96L12 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.63■■□□□ 1.05
CALR3Q96L12 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.63■■□□□ 1.05
CALR3Q96L12 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CALR3Q96L12 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CALR3Q96L12 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.63■■□□□ 1.05
CALR3Q96L12 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CALR3Q96L12 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.62■■□□□ 1.05
CALR3Q96L12 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CALR3Q96L12 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CALR3Q96L12 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms