Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 AC073210.2-201ENST00000430369 194 ntBASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 MIR4758-201ENST00000577688 71 ntBASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3KBP1Q96B97 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SH3KBP1Q96B97 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.27■□□□□ 0.83
SH3KBP1Q96B97 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 AL138781.1-201ENST00000566567 1274 ntBASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3KBP1Q96B97 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 AF106564.1-201ENST00000607058 2553 ntBASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 AC069152.1-201ENST00000438030 544 ntBASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 CDV3P1-201ENST00000471403 739 ntBASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 RARRES2P4-201ENST00000514074 484 ntBASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 AC016405.3-201ENST00000607710 860 ntBASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3KBP1Q96B97 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.24■□□□□ 0.83
SH3KBP1Q96B97 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 MIPEPP3-201ENST00000412105 444 ntBASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 FEM1AP4-201ENST00000443167 1987 ntBASIC20.23■□□□□ 0.83
SH3KBP1Q96B97 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SH3KBP1Q96B97 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms