Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 AC006015.1-201ENST00000429970 570 ntBASIC19.71■□□□□ 0.75
UBE2E3Q969T4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 FAM21FP-204ENST00000608637 956 ntBASIC19.71■□□□□ 0.75
UBE2E3Q969T4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.71■□□□□ 0.75
UBE2E3Q969T4 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.7■□□□□ 0.74
UBE2E3Q969T4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.7■□□□□ 0.74
UBE2E3Q969T4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
UBE2E3Q969T4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 MFSD11-216ENST00000590393 1141 ntBASIC19.69■□□□□ 0.74
UBE2E3Q969T4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBE2E3Q969T4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 BID-214ENST00000617586 542 ntTSL 5 BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 MIR2861-201ENST00000636310 90 ntBASIC19.68■□□□□ 0.74
UBE2E3Q969T4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBE2E3Q969T4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.67■□□□□ 0.74
UBE2E3Q969T4 LINC01521-201ENST00000504184 1943 ntBASIC19.67■□□□□ 0.74
UBE2E3Q969T4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 PGM5P4-201ENST00000421970 445 ntBASIC19.67■□□□□ 0.74
UBE2E3Q969T4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE2E3Q969T4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms