Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RPGRQ92834 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RPGRQ92834 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RPGRQ92834 KRASP1-201ENST00000407852 552 ntBASIC25.43■■□□□ 1.66
RPGRQ92834 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.43■■□□□ 1.66
RPGRQ92834 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.43■■□□□ 1.66
RPGRQ92834 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.43■■□□□ 1.66
RPGRQ92834 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.43■■□□□ 1.66
RPGRQ92834 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RPGRQ92834 AP001412.1-201ENST00000608405 714 ntBASIC25.43■■□□□ 1.66
RPGRQ92834 AL049637.2-201ENST00000641778 930 ntBASIC25.43■■□□□ 1.66
RPGRQ92834 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
RPGRQ92834 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
RPGRQ92834 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RPGRQ92834 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RPGRQ92834 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25.42■■□□□ 1.66
RPGRQ92834 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
RPGRQ92834 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RPGRQ92834 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.42■■□□□ 1.66
RPGRQ92834 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RPGRQ92834 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RPGRQ92834 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RPGRQ92834 AL390719.1-204ENST00000412397 1219 ntBASIC25.42■■□□□ 1.66
RPGRQ92834 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
RPGRQ92834 AC110285.5-201ENST00000611501 352 ntBASIC25.42■■□□□ 1.66
RPGRQ92834 AL356652.1-201ENST00000615962 565 ntBASIC25.42■■□□□ 1.66
RPGRQ92834 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RPGRQ92834 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
RPGRQ92834 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RPGRQ92834 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RPGRQ92834 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RPGRQ92834 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.41■■□□□ 1.66
RPGRQ92834 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.41■■□□□ 1.66
RPGRQ92834 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.41■■□□□ 1.66
RPGRQ92834 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.41■■□□□ 1.66
RPGRQ92834 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RPGRQ92834 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
RPGRQ92834 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RPGRQ92834 MIR1224-201ENST00000408193 85 ntBASIC25.41■■□□□ 1.66
RPGRQ92834 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
RPGRQ92834 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.41■■□□□ 1.66
RPGRQ92834 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC25.41■■□□□ 1.66
RPGRQ92834 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
RPGRQ92834 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
RPGRQ92834 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
RPGRQ92834 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
RPGRQ92834 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
RPGRQ92834 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RPGRQ92834 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RPGRQ92834 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RPGRQ92834 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RPGRQ92834 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RPGRQ92834 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RPGRQ92834 AL135905.2-201ENST00000584934 1404 ntBASIC25.4■■□□□ 1.66
RPGRQ92834 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RPGRQ92834 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
RPGRQ92834 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.4■■□□□ 1.66
RPGRQ92834 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
RPGRQ92834 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.4■■□□□ 1.66
RPGRQ92834 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.4■■□□□ 1.66
RPGRQ92834 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RPGRQ92834 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RPGRQ92834 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.4■■□□□ 1.66
RPGRQ92834 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RPGRQ92834 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
RPGRQ92834 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
RPGRQ92834 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.66
RPGRQ92834 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.39■■□□□ 1.66
RPGRQ92834 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.39■■□□□ 1.66
RPGRQ92834 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC25.39■■□□□ 1.66
RPGRQ92834 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.39■■□□□ 1.66
RPGRQ92834 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
RPGRQ92834 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RPGRQ92834 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.39■■□□□ 1.65
RPGRQ92834 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.38■■□□□ 1.65
RPGRQ92834 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.38■■□□□ 1.65
RPGRQ92834 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.38■■□□□ 1.65
RPGRQ92834 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.38■■□□□ 1.65
RPGRQ92834 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.38■■□□□ 1.65
RPGRQ92834 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.38■■□□□ 1.65
RPGRQ92834 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
RPGRQ92834 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
RPGRQ92834 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RPGRQ92834 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
RPGRQ92834 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.37■■□□□ 1.65
RPGRQ92834 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.37■■□□□ 1.65
RPGRQ92834 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RPGRQ92834 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RPGRQ92834 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
RPGRQ92834 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms