Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
AP3S1Q92572 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AP3S1Q92572 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3S1Q92572 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
AP3S1Q92572 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AP3S1Q92572 AP006587.3-201ENST00000525742 1516 ntBASIC18.07■□□□□ 0.48
AP3S1Q92572 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3S1Q92572 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
AP3S1Q92572 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
AP3S1Q92572 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S1Q92572 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
AP3S1Q92572 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S1Q92572 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S1Q92572 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S1Q92572 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S1Q92572 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S1Q92572 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S1Q92572 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
AP3S1Q92572 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3S1Q92572 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3S1Q92572 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S1Q92572 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
AP3S1Q92572 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.06■□□□□ 0.48
AP3S1Q92572 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.06■□□□□ 0.48
AP3S1Q92572 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3S1Q92572 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.06■□□□□ 0.48
AP3S1Q92572 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.06■□□□□ 0.48
AP3S1Q92572 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.06■□□□□ 0.48
AP3S1Q92572 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.06■□□□□ 0.48
AP3S1Q92572 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 AC021242.3-201ENST00000607598 1377 ntBASIC18.05■□□□□ 0.48
AP3S1Q92572 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.05■□□□□ 0.48
AP3S1Q92572 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
AP3S1Q92572 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.05■□□□□ 0.48
AP3S1Q92572 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.05■□□□□ 0.48
AP3S1Q92572 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 AC004408.2-201ENST00000623613 2777 ntBASIC18.05■□□□□ 0.48
AP3S1Q92572 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
AP3S1Q92572 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.05■□□□□ 0.48
AP3S1Q92572 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3S1Q92572 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3S1Q92572 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
AP3S1Q92572 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.04■□□□□ 0.48
AP3S1Q92572 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
AP3S1Q92572 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
AP3S1Q92572 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
AP3S1Q92572 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP3S1Q92572 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.03■□□□□ 0.48
AP3S1Q92572 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3S1Q92572 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.03■□□□□ 0.48
AP3S1Q92572 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
AP3S1Q92572 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3S1Q92572 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3S1Q92572 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3S1Q92572 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
AP3S1Q92572 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
AP3S1Q92572 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3S1Q92572 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3S1Q92572 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3S1Q92572 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.03■□□□□ 0.48
AP3S1Q92572 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3S1Q92572 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3S1Q92572 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP3S1Q92572 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.03■□□□□ 0.48
AP3S1Q92572 AC092720.2-201ENST00000602388 1665 ntBASIC18.03■□□□□ 0.48
AP3S1Q92572 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
AP3S1Q92572 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.02■□□□□ 0.48
AP3S1Q92572 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3S1Q92572 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3S1Q92572 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.02■□□□□ 0.48
AP3S1Q92572 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3S1Q92572 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3S1Q92572 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
AP3S1Q92572 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP3S1Q92572 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP3S1Q92572 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms