Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHC3Q92529 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SHC3Q92529 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHC3Q92529 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SHC3Q92529 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SHC3Q92529 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.93■■□□□ 1.1
SHC3Q92529 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHC3Q92529 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.93■■□□□ 1.1
SHC3Q92529 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.93■■□□□ 1.1
SHC3Q92529 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.93■■□□□ 1.1
SHC3Q92529 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
SHC3Q92529 AL591742.1-201ENST00000604433 565 ntBASIC21.93■■□□□ 1.1
SHC3Q92529 AC073130.3-201ENST00000624389 2278 ntBASIC21.92■■□□□ 1.1
SHC3Q92529 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHC3Q92529 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.92■■□□□ 1.1
SHC3Q92529 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SHC3Q92529 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC3Q92529 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.92■■□□□ 1.1
SHC3Q92529 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHC3Q92529 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC3Q92529 DUX4L16-201ENST00000555130 1264 ntBASIC21.92■■□□□ 1.1
SHC3Q92529 AL162412.1-201ENST00000567129 965 ntBASIC21.92■■□□□ 1.1
SHC3Q92529 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.92■■□□□ 1.1
SHC3Q92529 FAM21FP-204ENST00000608637 956 ntBASIC21.92■■□□□ 1.1
SHC3Q92529 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.92■■□□□ 1.1
SHC3Q92529 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
SHC3Q92529 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SHC3Q92529 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC3Q92529 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHC3Q92529 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.92■■□□□ 1.1
SHC3Q92529 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SHC3Q92529 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.91■■□□□ 1.1
SHC3Q92529 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.91■■□□□ 1.1
SHC3Q92529 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 CNN2P6-201ENST00000439038 900 ntBASIC21.91■■□□□ 1.1
SHC3Q92529 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.91■■□□□ 1.1
SHC3Q92529 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.91■■□□□ 1.1
SHC3Q92529 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.91■■□□□ 1.1
SHC3Q92529 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
SHC3Q92529 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SHC3Q92529 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
SHC3Q92529 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHC3Q92529 PKD1P6-201ENST00000343738 4769 ntBASIC21.91■■□□□ 1.1
SHC3Q92529 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SHC3Q92529 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.9■■□□□ 1.1
SHC3Q92529 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.9■■□□□ 1.1
SHC3Q92529 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SHC3Q92529 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.9■■□□□ 1.1
SHC3Q92529 AC022517.1-201ENST00000592429 346 ntBASIC21.9■■□□□ 1.1
SHC3Q92529 AC011767.1-201ENST00000617410 1153 ntBASIC21.9■■□□□ 1.1
SHC3Q92529 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHC3Q92529 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHC3Q92529 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SHC3Q92529 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHC3Q92529 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHC3Q92529 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.89■■□□□ 1.09
SHC3Q92529 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.89■■□□□ 1.09
SHC3Q92529 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SHC3Q92529 AC016405.3-201ENST00000607710 860 ntBASIC21.89■■□□□ 1.09
SHC3Q92529 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.89■■□□□ 1.09
SHC3Q92529 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHC3Q92529 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SHC3Q92529 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.89■■□□□ 1.09
SHC3Q92529 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
SHC3Q92529 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SHC3Q92529 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.89■■□□□ 1.09
SHC3Q92529 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.89■■□□□ 1.09
SHC3Q92529 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.88■■□□□ 1.09
SHC3Q92529 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SHC3Q92529 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.88■■□□□ 1.09
SHC3Q92529 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.88■■□□□ 1.09
SHC3Q92529 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.88■■□□□ 1.09
SHC3Q92529 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHC3Q92529 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SHC3Q92529 AL162377.1-201ENST00000618844 1793 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms