Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD6Q8TD26 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHD6Q8TD26 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
CHD6Q8TD26 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.78■□□□□ 0.6
CHD6Q8TD26 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD6Q8TD26 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.78■□□□□ 0.6
CHD6Q8TD26 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.78■□□□□ 0.6
CHD6Q8TD26 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.78■□□□□ 0.6
CHD6Q8TD26 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHD6Q8TD26 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CHD6Q8TD26 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD6Q8TD26 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CHD6Q8TD26 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHD6Q8TD26 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD6Q8TD26 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHD6Q8TD26 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.77■□□□□ 0.6
CHD6Q8TD26 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHD6Q8TD26 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.77■□□□□ 0.6
CHD6Q8TD26 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.77■□□□□ 0.6
CHD6Q8TD26 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD6Q8TD26 AP005242.2-201ENST00000580065 1175 ntBASIC18.77■□□□□ 0.59
CHD6Q8TD26 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.77■□□□□ 0.59
CHD6Q8TD26 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.77■□□□□ 0.59
CHD6Q8TD26 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD6Q8TD26 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.77■□□□□ 0.59
CHD6Q8TD26 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHD6Q8TD26 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
CHD6Q8TD26 AC061975.6-201ENST00000579045 1553 ntBASIC18.76■□□□□ 0.59
CHD6Q8TD26 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHD6Q8TD26 AL359075.1-203ENST00000462729 1002 ntBASIC18.76■□□□□ 0.59
CHD6Q8TD26 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.76■□□□□ 0.59
CHD6Q8TD26 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.76■□□□□ 0.59
CHD6Q8TD26 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CHD6Q8TD26 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHD6Q8TD26 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD6Q8TD26 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD6Q8TD26 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD6Q8TD26 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD6Q8TD26 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD6Q8TD26 EGLN1P1-201ENST00000531623 762 ntBASIC18.76■□□□□ 0.59
CHD6Q8TD26 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD6Q8TD26 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD6Q8TD26 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CHD6Q8TD26 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD6Q8TD26 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 PMS2P1-201ENST00000431037 1228 ntBASIC18.75■□□□□ 0.59
CHD6Q8TD26 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD6Q8TD26 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD6Q8TD26 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.75■□□□□ 0.59
CHD6Q8TD26 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD6Q8TD26 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD6Q8TD26 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD6Q8TD26 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD6Q8TD26 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD6Q8TD26 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD6Q8TD26 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD6Q8TD26 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 FAM220CP-201ENST00000395253 831 ntBASIC18.74■□□□□ 0.59
CHD6Q8TD26 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD6Q8TD26 UNC93B7-201ENST00000509439 705 ntBASIC18.74■□□□□ 0.59
CHD6Q8TD26 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD6Q8TD26 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD6Q8TD26 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 NBPF21P-201ENST00000425093 1451 ntBASIC18.74■□□□□ 0.59
CHD6Q8TD26 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD6Q8TD26 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 INGX-201ENST00000359239 846 ntBASIC18.74■□□□□ 0.59
CHD6Q8TD26 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD6Q8TD26 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.74■□□□□ 0.59
CHD6Q8TD26 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD6Q8TD26 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD6Q8TD26 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms