Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PCDH19Q8TAB3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 AC007322.3-201ENST00000426526 701 ntBASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH19Q8TAB3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 KRT18P11-201ENST00000435214 1283 ntBASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 MFSD11-216ENST00000590393 1141 ntBASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 AC020907.5-201ENST00000624372 1936 ntBASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDH19Q8TAB3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 MIR2861-201ENST00000636310 90 ntBASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH19Q8TAB3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH19Q8TAB3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 AC080038.1-201ENST00000611274 1154 ntBASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH19Q8TAB3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms