Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC12.99□□□□□ -0.33
SVIPQ8NHG7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 AC118758.2-201ENST00000614242 2813 ntBASIC12.98□□□□□ -0.33
SVIPQ8NHG7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 FAIM2-205ENST00000550890 2094 ntTSL 2 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 INGX-202ENST00000489074 768 ntBASIC12.98□□□□□ -0.33
SVIPQ8NHG7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SVIPQ8NHG7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.97□□□□□ -0.33
SVIPQ8NHG7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SVIPQ8NHG7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SVIPQ8NHG7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SVIPQ8NHG7 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SVIPQ8NHG7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
SVIPQ8NHG7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SVIPQ8NHG7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms