Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 AC126177.7-201ENST00000547904 679 ntBASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SPTSSBQ8NFR3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SPTSSBQ8NFR3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SPTSSBQ8NFR3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
SPTSSBQ8NFR3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC11.27□□□□□ -0.6
SPTSSBQ8NFR3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SPTSSBQ8NFR3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SPTSSBQ8NFR3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC11.27□□□□□ -0.6
SPTSSBQ8NFR3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SPTSSBQ8NFR3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC11.27□□□□□ -0.6
SPTSSBQ8NFR3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC11.27□□□□□ -0.6
SPTSSBQ8NFR3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 AC098818.2-201ENST00000564925 2320 ntBASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SPTSSBQ8NFR3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 NEFHP1-201ENST00000412845 2629 ntBASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC11.26□□□□□ -0.61
SPTSSBQ8NFR3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms