Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC233702.5-201ENST00000584107 538 ntBASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF248Q8NDW4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 AC092053.2-201ENST00000640557 1818 ntBASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 POM121L13P-201ENST00000422362 380 ntBASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 AP001412.1-201ENST00000608405 714 ntBASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF248Q8NDW4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 KRT18P68-201ENST00000392293 1000 ntBASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 RPS2P55-201ENST00000397318 883 ntBASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 AC107956.1-201ENST00000494359 873 ntBASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ZNF248Q8NDW4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF248Q8NDW4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.58■□□□□ 0.73
ZNF248Q8NDW4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF248Q8NDW4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF248Q8NDW4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF248Q8NDW4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
ZNF248Q8NDW4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF248Q8NDW4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNF248Q8NDW4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 AC080038.3-201ENST00000623346 1952 ntBASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 AC133561.5-201ENST00000635547 218 ntBASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF248Q8NDW4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms