Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 AC008403.3-201ENST00000598924 454 ntBASIC22.35■■□□□ 1.17
RNF169Q8NCN4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RNF169Q8NCN4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 AC105020.6-201ENST00000621523 1217 ntBASIC22.34■■□□□ 1.17
RNF169Q8NCN4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RNF169Q8NCN4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.33■■□□□ 1.17
RNF169Q8NCN4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF169Q8NCN4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RNF169Q8NCN4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF169Q8NCN4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
RNF169Q8NCN4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 UNC93B4-201ENST00000505679 747 ntBASIC22.32■■□□□ 1.16
RNF169Q8NCN4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 SOX15-203ENST00000570788 1093 ntBASIC22.32■■□□□ 1.16
RNF169Q8NCN4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.32■■□□□ 1.16
RNF169Q8NCN4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF169Q8NCN4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF169Q8NCN4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms