Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 PNMA6B-201ENST00000538162 1200 ntBASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 AC073648.6-201ENST00000641589 218 ntBASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 AC087633.2-202ENST00000565166 1439 ntBASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 AC092368.3-202ENST00000574180 1591 ntBASIC19.4■□□□□ 0.7
SLC38A9Q8NBW4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.39■□□□□ 0.7
SLC38A9Q8NBW4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC38A9Q8NBW4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC38A9Q8NBW4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SLC38A9Q8NBW4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 GCSHP5-201ENST00000443090 522 ntBASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC38A9Q8NBW4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 AC093827.2-201ENST00000512654 315 ntBASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC38A9Q8NBW4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 UNC93B4-201ENST00000505679 747 ntBASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC38A9Q8NBW4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 C2orf69P4-201ENST00000565394 541 ntBASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC38A9Q8NBW4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A9Q8NBW4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
SLC38A9Q8NBW4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A9Q8NBW4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC38A9Q8NBW4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A9Q8NBW4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC38A9Q8NBW4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC38A9Q8NBW4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC38A9Q8NBW4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC38A9Q8NBW4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms