Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 AC027702.1-201ENST00000563810 1770 ntBASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC9CQ8N5M4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 AC007322.3-201ENST00000426526 701 ntBASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 CDV3P1-201ENST00000471403 739 ntBASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 TERF1P5-201ENST00000477545 1207 ntBASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 AC010536.3-201ENST00000620306 533 ntBASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 FEM1AP1-201ENST00000431297 1995 ntBASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TTC9CQ8N5M4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 AC016769.1-201ENST00000409132 1010 ntBASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.17■□□□□ 0.18
TTC9CQ8N5M4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 FP700111.2-201ENST00000619190 1892 ntBASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 AL162430.1-201ENST00000480705 870 ntBASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.16■□□□□ 0.18
TTC9CQ8N5M4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms