Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AC112907.3-201ENST00000577781 2400 ntBASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM42Q8IWZ5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 AC110285.6-201ENST00000617652 491 ntBASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 BX005040.4-201ENST00000637145 1518 ntBASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM42Q8IWZ5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
TRIM42Q8IWZ5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM42Q8IWZ5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM42Q8IWZ5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM42Q8IWZ5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM42Q8IWZ5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM42Q8IWZ5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.39■□□□□ 0.86
TRIM42Q8IWZ5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM42Q8IWZ5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM42Q8IWZ5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM42Q8IWZ5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 SMG8-203ENST00000578922 2178 ntBASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM42Q8IWZ5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM42Q8IWZ5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 UNC93B3-201ENST00000308076 687 ntBASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 AC092720.2-201ENST00000602388 1665 ntBASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM42Q8IWZ5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM42Q8IWZ5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM42Q8IWZ5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRIM42Q8IWZ5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM42Q8IWZ5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRIM42Q8IWZ5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
TRIM42Q8IWZ5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRIM42Q8IWZ5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TRIM42Q8IWZ5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM42Q8IWZ5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM42Q8IWZ5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
TRIM42Q8IWZ5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM42Q8IWZ5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM42Q8IWZ5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM42Q8IWZ5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM42Q8IWZ5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.35■□□□□ 0.85
TRIM42Q8IWZ5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms