Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFPL4BQ6ZWI9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.27■□□□□ 0.51
RFPL4BQ6ZWI9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFPL4BQ6ZWI9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.26■□□□□ 0.51
RFPL4BQ6ZWI9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.25■□□□□ 0.51
RFPL4BQ6ZWI9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 AC053503.5-201ENST00000601508 636 ntBASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.24■□□□□ 0.51
RFPL4BQ6ZWI9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 AP004607.4-201ENST00000530158 1459 ntBASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 AC104187.1-201ENST00000607510 612 ntBASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 MIR5787-201ENST00000611784 55 ntBASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFPL4BQ6ZWI9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms