Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
CCDC141Q6ZP82 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC141Q6ZP82 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
CCDC141Q6ZP82 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC141Q6ZP82 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
CCDC141Q6ZP82 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
CCDC141Q6ZP82 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 DHDH-203ENST00000522614 776 ntTSL 5 BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 BX088651.1-201ENST00000540551 451 ntBASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 AL049637.2-201ENST00000641778 930 ntBASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CCDC141Q6ZP82 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CCDC141Q6ZP82 KRASP1-201ENST00000407852 552 ntBASIC30.89■■■□□ 2.53
CCDC141Q6ZP82 ECEL1P3-201ENST00000427961 737 ntBASIC30.89■■■□□ 2.53
CCDC141Q6ZP82 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CCDC141Q6ZP82 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC30.89■■■□□ 2.53
CCDC141Q6ZP82 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.53
CCDC141Q6ZP82 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CCDC141Q6ZP82 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC141Q6ZP82 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC141Q6ZP82 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC141Q6ZP82 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC141Q6ZP82 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
CCDC141Q6ZP82 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC30.88■■■□□ 2.53
CCDC141Q6ZP82 AC006557.6-201ENST00000623071 864 ntBASIC30.88■■■□□ 2.53
CCDC141Q6ZP82 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 TERT-206ENST00000508104 2486 ntTSL 5 BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 THEM4-205ENST00000489410 643 ntTSL 2 BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC141Q6ZP82 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC141Q6ZP82 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC141Q6ZP82 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC141Q6ZP82 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC141Q6ZP82 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC141Q6ZP82 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCDC141Q6ZP82 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
CCDC141Q6ZP82 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC30.86■■■□□ 2.53
CCDC141Q6ZP82 GUSBP5-202ENST00000510805 1989 ntBASIC30.86■■■□□ 2.53
CCDC141Q6ZP82 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 AC113410.3-201ENST00000623366 203 ntBASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 GALC-202ENST00000393568 2054 ntTSL 2 BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
CCDC141Q6ZP82 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC141Q6ZP82 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC30.84■■■□□ 2.53
CCDC141Q6ZP82 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC141Q6ZP82 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC30.84■■■□□ 2.53
CCDC141Q6ZP82 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC141Q6ZP82 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC141Q6ZP82 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC141Q6ZP82 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 AC110285.5-201ENST00000611501 352 ntBASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CCDC141Q6ZP82 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
CCDC141Q6ZP82 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC30.82■■■□□ 2.53
CCDC141Q6ZP82 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms