Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.67■□□□□ 0.58
SMARCD3Q6STE5 POU5F1P4-201ENST00000413175 1085 ntBASIC18.67■□□□□ 0.58
SMARCD3Q6STE5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD3Q6STE5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCD3Q6STE5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.67■□□□□ 0.58
SMARCD3Q6STE5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SMARCD3Q6STE5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SMARCD3Q6STE5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMARCD3Q6STE5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SMARCD3Q6STE5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SMARCD3Q6STE5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.66■□□□□ 0.58
SMARCD3Q6STE5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 AC079140.4-201ENST00000507448 529 ntBASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 AC007952.6-201ENST00000573168 2673 ntBASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 AC003957.1-201ENST00000625108 2673 ntBASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 KRT87P-202ENST00000534226 1464 ntBASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCD3Q6STE5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMARCD3Q6STE5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SMARCD3Q6STE5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMARCD3Q6STE5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.64■□□□□ 0.58
SMARCD3Q6STE5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMARCD3Q6STE5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMARCD3Q6STE5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCD3Q6STE5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 AC112907.3-201ENST00000577781 2400 ntBASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 AL139246.5-201ENST00000606645 996 ntBASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMARCD3Q6STE5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms