Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
C11orf88Q6PI97 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf88Q6PI97 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf88Q6PI97 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf88Q6PI97 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf88Q6PI97 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf88Q6PI97 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf88Q6PI97 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf88Q6PI97 BX842568.3-201ENST00000418104 571 ntBASIC17.77■□□□□ 0.44
C11orf88Q6PI97 AC006455.2-201ENST00000429931 906 ntBASIC17.77■□□□□ 0.44
C11orf88Q6PI97 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf88Q6PI97 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
C11orf88Q6PI97 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C11orf88Q6PI97 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C11orf88Q6PI97 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.77■□□□□ 0.43
C11orf88Q6PI97 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
C11orf88Q6PI97 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C11orf88Q6PI97 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C11orf88Q6PI97 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
C11orf88Q6PI97 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
C11orf88Q6PI97 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
C11orf88Q6PI97 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 AL020996.1-203ENST00000536896 2307 ntBASIC17.76■□□□□ 0.43
C11orf88Q6PI97 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 AC233992.3-201ENST00000607491 485 ntBASIC17.76■□□□□ 0.43
C11orf88Q6PI97 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.76■□□□□ 0.43
C11orf88Q6PI97 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 AC026271.2-201ENST00000428091 497 ntBASIC17.75■□□□□ 0.43
C11orf88Q6PI97 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 MIR3181-201ENST00000578512 73 ntBASIC17.75■□□□□ 0.43
C11orf88Q6PI97 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.75■□□□□ 0.43
C11orf88Q6PI97 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
C11orf88Q6PI97 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 AP005212.1-201ENST00000581547 1997 ntBASIC17.74■□□□□ 0.43
C11orf88Q6PI97 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 IRS3P-201ENST00000223076 1006 ntBASIC17.74■□□□□ 0.43
C11orf88Q6PI97 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 AC008764.7-201ENST00000593779 1081 ntBASIC17.74■□□□□ 0.43
C11orf88Q6PI97 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
C11orf88Q6PI97 AL049796.1-201ENST00000565336 1766 ntBASIC17.74■□□□□ 0.43
C11orf88Q6PI97 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
C11orf88Q6PI97 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms