Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNKSR3Q6P9H4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CNKSR3Q6P9H4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 AL355075.4-201ENST00000554988 638 ntBASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 AC097493.4-201ENST00000641197 219 ntBASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CNKSR3Q6P9H4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNKSR3Q6P9H4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 AC012306.2-201ENST00000609350 630 ntBASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNKSR3Q6P9H4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNKSR3Q6P9H4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.21■■□□□ 1.15
CNKSR3Q6P9H4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.21■■□□□ 1.15
CNKSR3Q6P9H4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CNKSR3Q6P9H4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CNKSR3Q6P9H4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CNKSR3Q6P9H4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNKSR3Q6P9H4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNKSR3Q6P9H4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNKSR3Q6P9H4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.2■■□□□ 1.15
CNKSR3Q6P9H4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CNKSR3Q6P9H4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CNKSR3Q6P9H4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CNKSR3Q6P9H4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CNKSR3Q6P9H4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CNKSR3Q6P9H4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CNKSR3Q6P9H4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CNKSR3Q6P9H4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CNKSR3Q6P9H4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CNKSR3Q6P9H4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms