Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
KRT40Q6A162 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
KRT40Q6A162 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
KRT40Q6A162 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.76■■□□□ 1.39
KRT40Q6A162 AC011767.1-201ENST00000617410 1153 ntBASIC23.76■■□□□ 1.39
KRT40Q6A162 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.76■■□□□ 1.39
KRT40Q6A162 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
KRT40Q6A162 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KRT40Q6A162 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT40Q6A162 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT40Q6A162 AC092667.1-201ENST00000434301 2586 ntBASIC23.75■■□□□ 1.39
KRT40Q6A162 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT40Q6A162 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.75■■□□□ 1.39
KRT40Q6A162 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KRT40Q6A162 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.75■■□□□ 1.39
KRT40Q6A162 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.75■■□□□ 1.39
KRT40Q6A162 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.75■■□□□ 1.39
KRT40Q6A162 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KRT40Q6A162 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT40Q6A162 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT40Q6A162 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT40Q6A162 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
KRT40Q6A162 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
KRT40Q6A162 AC027702.1-201ENST00000563810 1770 ntBASIC23.75■■□□□ 1.39
KRT40Q6A162 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KRT40Q6A162 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.75■■□□□ 1.39
KRT40Q6A162 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT40Q6A162 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT40Q6A162 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KRT40Q6A162 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.74■■□□□ 1.39
KRT40Q6A162 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT40Q6A162 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT40Q6A162 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT40Q6A162 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.74■■□□□ 1.39
KRT40Q6A162 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.74■■□□□ 1.39
KRT40Q6A162 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
KRT40Q6A162 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.74■■□□□ 1.39
KRT40Q6A162 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
KRT40Q6A162 AP005212.1-201ENST00000581547 1997 ntBASIC23.74■■□□□ 1.39
KRT40Q6A162 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
KRT40Q6A162 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT40Q6A162 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KRT40Q6A162 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
KRT40Q6A162 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KRT40Q6A162 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.73■■□□□ 1.39
KRT40Q6A162 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KRT40Q6A162 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.73■■□□□ 1.39
KRT40Q6A162 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
KRT40Q6A162 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KRT40Q6A162 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KRT40Q6A162 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.73■■□□□ 1.39
KRT40Q6A162 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.73■■□□□ 1.39
KRT40Q6A162 MIR4651-201ENST00000582622 73 ntBASIC23.73■■□□□ 1.39
KRT40Q6A162 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
KRT40Q6A162 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
KRT40Q6A162 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.73■■□□□ 1.39
KRT40Q6A162 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
KRT40Q6A162 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
KRT40Q6A162 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.72■■□□□ 1.39
KRT40Q6A162 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
KRT40Q6A162 AC010536.3-201ENST00000620306 533 ntBASIC23.72■■□□□ 1.39
KRT40Q6A162 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.72■■□□□ 1.39
KRT40Q6A162 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.72■■□□□ 1.39
KRT40Q6A162 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KRT40Q6A162 LINC01521-201ENST00000504184 1943 ntBASIC23.72■■□□□ 1.39
KRT40Q6A162 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
KRT40Q6A162 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
KRT40Q6A162 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
KRT40Q6A162 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
KRT40Q6A162 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.71■■□□□ 1.39
KRT40Q6A162 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.71■■□□□ 1.39
KRT40Q6A162 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
KRT40Q6A162 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.71■■□□□ 1.39
KRT40Q6A162 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
KRT40Q6A162 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.71■■□□□ 1.39
KRT40Q6A162 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT40Q6A162 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.71■■□□□ 1.39
KRT40Q6A162 AL121603.2-201ENST00000557373 2117 ntBASIC23.71■■□□□ 1.39
KRT40Q6A162 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
KRT40Q6A162 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.71■■□□□ 1.39
KRT40Q6A162 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.7■■□□□ 1.39
KRT40Q6A162 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
KRT40Q6A162 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KRT40Q6A162 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KRT40Q6A162 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms