Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 AC117500.6-201ENST00000624871 588 ntBASIC11.39□□□□□ -0.59
UBR4Q5T4S7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.39□□□□□ -0.59
UBR4Q5T4S7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.39□□□□□ -0.59
UBR4Q5T4S7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 HLA-V-201ENST00000429037 534 ntBASIC11.38□□□□□ -0.59
UBR4Q5T4S7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 PMS2P1-201ENST00000431037 1228 ntBASIC11.38□□□□□ -0.59
UBR4Q5T4S7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
UBR4Q5T4S7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 AC069148.1-201ENST00000608741 768 ntBASIC11.37□□□□□ -0.59
UBR4Q5T4S7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 AC005829.2-201ENST00000571422 1056 ntBASIC11.37□□□□□ -0.59
UBR4Q5T4S7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 AC092647.4-201ENST00000457211 535 ntBASIC11.37□□□□□ -0.59
UBR4Q5T4S7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 AC116562.2-201ENST00000507042 360 ntBASIC11.37□□□□□ -0.59
UBR4Q5T4S7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC11.37□□□□□ -0.59
UBR4Q5T4S7 AL160237.2-201ENST00000556165 472 ntBASIC11.37□□□□□ -0.59
UBR4Q5T4S7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 AP002469.2-201ENST00000531724 424 ntBASIC11.36□□□□□ -0.59
UBR4Q5T4S7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 AL138966.2-201ENST00000621997 464 ntBASIC11.36□□□□□ -0.59
UBR4Q5T4S7 KRT8P8-201ENST00000434750 1448 ntBASIC11.36□□□□□ -0.59
UBR4Q5T4S7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 MIR574-201ENST00000385209 96 ntBASIC11.36□□□□□ -0.59
UBR4Q5T4S7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 AC092865.5-201ENST00000545435 363 ntBASIC11.36□□□□□ -0.59
UBR4Q5T4S7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 GRAMD4P8-201ENST00000605465 1115 ntBASIC11.36□□□□□ -0.59
UBR4Q5T4S7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 AC022494.1-201ENST00000466044 728 ntBASIC11.36□□□□□ -0.59
UBR4Q5T4S7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC11.36□□□□□ -0.59
UBR4Q5T4S7 AC120498.8-201ENST00000614275 531 ntBASIC11.36□□□□□ -0.59
UBR4Q5T4S7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC11.35□□□□□ -0.59
UBR4Q5T4S7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
UBR4Q5T4S7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC11.35□□□□□ -0.59
UBR4Q5T4S7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC11.35□□□□□ -0.59
UBR4Q5T4S7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms