Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNAI3Q3KNW1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SNAI3Q3KNW1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 AC020907.5-201ENST00000624372 1936 ntBASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 AC137761.2-201ENST00000561729 223 ntBASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 AC145350.3-201ENST00000569033 163 ntBASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNAI3Q3KNW1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 AC007322.3-201ENST00000426526 701 ntBASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNAI3Q3KNW1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNAI3Q3KNW1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNAI3Q3KNW1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
SNAI3Q3KNW1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.77■□□□□ 0.43
SNAI3Q3KNW1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNAI3Q3KNW1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 AC010536.3-201ENST00000620306 533 ntBASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNAI3Q3KNW1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI3Q3KNW1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI3Q3KNW1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNAI3Q3KNW1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms