Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO1Q2MKA7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RSPO1Q2MKA7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RSPO1Q2MKA7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 AC011767.1-201ENST00000617410 1153 ntBASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RSPO1Q2MKA7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 CNN2P6-201ENST00000439038 900 ntBASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 AC022517.1-201ENST00000592429 346 ntBASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 AL591742.1-201ENST00000604433 565 ntBASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 AL512408.1-201ENST00000569378 2000 ntBASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RSPO1Q2MKA7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.79■□□□□ 0.44
RSPO1Q2MKA7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 CDV3P1-201ENST00000471403 739 ntBASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 AC007322.4-201ENST00000509611 723 ntBASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 AC016405.3-201ENST00000607710 860 ntBASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.78■□□□□ 0.44
RSPO1Q2MKA7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms