Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 TOM70YNL121C 1854 nt3.78□□□□□ -1.8
UBP3Q01477 YGR069WYGR069W 336 nt3.78□□□□□ -1.8
UBP3Q01477 YHR214C-EYHR214C-E 300 nt3.78□□□□□ -1.8
UBP3Q01477 YIL012WYIL012W 342 nt3.78□□□□□ -1.8
UBP3Q01477 MSL1YIR009W 336 nt3.78□□□□□ -1.8
UBP3Q01477 YAR070CYAR070C 300 nt3.78□□□□□ -1.8
UBP3Q01477 OSH3YHR073W 2991 nt3.78□□□□□ -1.81
UBP3Q01477 DIA2YOR080W 2199 nt3.78□□□□□ -1.81
UBP3Q01477 snR80snR80 171 nt3.77□□□□□ -1.81
UBP3Q01477 YER079C-AYER079C-A 339 nt3.77□□□□□ -1.81
UBP3Q01477 MTC3YGL226W 372 nt3.77□□□□□ -1.81
UBP3Q01477 SOD1YJR104C 465 nt3.77□□□□□ -1.81
UBP3Q01477 YPL080CYPL080C 327 nt3.77□□□□□ -1.81
UBP3Q01477 ICR1ICR1 3199 nt3.77□□□□□ -1.81
UBP3Q01477 YBP1YBR216C 2025 nt3.77□□□□□ -1.81
UBP3Q01477 LYS9YNR050C 1341 nt3.76□□□□□ -1.81 RIP-Chip
UBP3Q01477 APC11YDL008W 498 nt3.76□□□□□ -1.81
UBP3Q01477 RRT13YER066W 558 nt3.76□□□□□ -1.81
UBP3Q01477 PGA1YNL158W 597 nt3.76□□□□□ -1.81
UBP3Q01477 RFC3YNL290W 1023 nt3.76□□□□□ -1.81
UBP3Q01477 HEM4YOR278W 828 nt3.76□□□□□ -1.81
UBP3Q01477 SLM6YBR266C 453 nt3.76□□□□□ -1.81
UBP3Q01477 KAP95YLR347C 2586 nt3.76□□□□□ -1.81
UBP3Q01477 VPS53YJL029C 2469 nt3.76□□□□□ -1.81
UBP3Q01477 EXO84YBR102C 2262 nt3.75□□□□□ -1.81
UBP3Q01477 SSM4YIL030C 3960 nt3.75□□□□□ -1.81
UBP3Q01477 NDD1YOR372C 1665 nt3.75□□□□□ -1.81 RIP-Chip
UBP3Q01477 TAF1YGR274C 3201 nt3.75□□□□□ -1.81 RIP-Chip
UBP3Q01477 MTR4YJL050W 3222 nt3.75□□□□□ -1.81 RIP-Chip
UBP3Q01477 ALA1YOR335C 2877 nt3.75□□□□□ -1.81
UBP3Q01477 SNT1YCR033W 3681 nt3.75□□□□□ -1.81
UBP3Q01477 YDR406W-AYDR406W-A 246 nt3.75□□□□□ -1.81
UBP3Q01477 YER076W-AYER076W-A 348 nt3.75□□□□□ -1.81
UBP3Q01477 YFL065CYFL065C 309 nt3.75□□□□□ -1.81
UBP3Q01477 TMA19YKL056C 504 nt3.75□□□□□ -1.81
UBP3Q01477 RPL9BYNL067W 576 nt3.75□□□□□ -1.81
UBP3Q01477 RPB11YOL005C 363 nt3.75□□□□□ -1.81
UBP3Q01477 YKL100CYKL100C 1764 nt3.75□□□□□ -1.81
UBP3Q01477 YDR210W-BYDR210W-B 5313 nt3.75□□□□□ -1.81
UBP3Q01477 YDR261W-BYDR261W-B 5313 nt3.75□□□□□ -1.81
UBP3Q01477 YFL002W-AYFL002W-A 5313 nt3.75□□□□□ -1.81
UBP3Q01477 YGR161W-BYGR161W-B 5313 nt3.75□□□□□ -1.81
UBP3Q01477 YLR410W-BYLR410W-B 5313 nt3.75□□□□□ -1.81
UBP3Q01477 YCL019WYCL019W 5313 nt3.75□□□□□ -1.81
UBP3Q01477 NOT5YPR072W 1683 nt3.75□□□□□ -1.81
UBP3Q01477 GPI13YLL031C 3054 nt3.74□□□□□ -1.81
UBP3Q01477 YFR056CYFR056C 369 nt3.74□□□□□ -1.81
UBP3Q01477 YIR040CYIR040C 333 nt3.74□□□□□ -1.81
UBP3Q01477 SMA2YML066C 1110 nt3.74□□□□□ -1.81
UBP3Q01477 LSM2YBL026W 288 nt3.73□□□□□ -1.81
UBP3Q01477 YPL039WYPL039W 951 nt3.73□□□□□ -1.81 RIP-Chip
UBP3Q01477 IOC3YFR013W 2364 nt3.73□□□□□ -1.81 RIP-Chip
UBP3Q01477 POM152YMR129W 4014 nt3.73□□□□□ -1.81
UBP3Q01477 ENA5YDR038C 3276 nt3.72□□□□□ -1.81
UBP3Q01477 ENA2YDR039C 3276 nt3.72□□□□□ -1.81
UBP3Q01477 ENA1YDR040C 3276 nt3.72□□□□□ -1.81
UBP3Q01477 ERG28YER044C 447 nt3.72□□□□□ -1.81
UBP3Q01477 AST2YER101C 1293 nt3.72□□□□□ -1.81
UBP3Q01477 YGL188C-AYGL188C-A 141 nt3.72□□□□□ -1.81
UBP3Q01477 NOP19YGR251W 591 nt3.72□□□□□ -1.81
UBP3Q01477 YBL008W-AYBL008W-A 240 nt3.72□□□□□ -1.81
UBP3Q01477 snR191snR191 274 nt3.72□□□□□ -1.81
UBP3Q01477 ARO1YDR127W 4767 nt3.72□□□□□ -1.81
UBP3Q01477 VHR2YER064C 1518 nt3.71□□□□□ -1.82
UBP3Q01477 YLR352WYLR352W 2424 nt3.71□□□□□ -1.82
UBP3Q01477 LRG1YDL240W 3054 nt3.71□□□□□ -1.82
UBP3Q01477 RIX1YHR197W 2292 nt3.71□□□□□ -1.82
UBP3Q01477 YDR169C-AYDR169C-A 150 nt3.71□□□□□ -1.82
UBP3Q01477 RPL29YFR032C-A 180 nt3.71□□□□□ -1.82
UBP3Q01477 HYR1YIR037W 492 nt3.71□□□□□ -1.82
UBP3Q01477 RPS8AYBL072C 603 nt3.71□□□□□ -1.82
UBP3Q01477 YBL073WYBL073W 312 nt3.71□□□□□ -1.82
UBP3Q01477 YOL160WYOL160W 342 nt3.71□□□□□ -1.82
UBP3Q01477 RPL20BYOR312C 519 nt3.71□□□□□ -1.82 RIP-Chip
UBP3Q01477 YBR137WYBR137W 540 nt3.71□□□□□ -1.82
UBP3Q01477 FLO9YAL063C 3969 nt3.71□□□□□ -1.82
UBP3Q01477 YCK3YER123W 1575 nt3.71□□□□□ -1.82
UBP3Q01477 CWC22YGR278W 1734 nt3.7□□□□□ -1.82
UBP3Q01477 HMF1YER057C 390 nt3.7□□□□□ -1.82
UBP3Q01477 RPL22AYLR061W 366 nt3.7□□□□□ -1.82
UBP3Q01477 IRC10YOL015W 1761 nt3.7□□□□□ -1.82 RIP-Chip
UBP3Q01477 RAD2YGR258C 3096 nt3.7□□□□□ -1.82
UBP3Q01477 STU1YBL034C 4542 nt3.69□□□□□ -1.82
UBP3Q01477 MDM32YOR147W 1869 nt3.69□□□□□ -1.82 RIP-Chip
UBP3Q01477 CDC36YDL165W 576 nt3.69□□□□□ -1.82
UBP3Q01477 ATP8Q0080 147 nt3.69□□□□□ -1.82
UBP3Q01477 BAT1YHR208W 1182 nt3.69□□□□□ -1.82 RIP-Chip
UBP3Q01477 RPS21BYJL136C 264 nt3.69□□□□□ -1.82
UBP3Q01477 YPL229WYPL229W 621 nt3.69□□□□□ -1.82
UBP3Q01477 snR51snR51 107 nt3.69□□□□□ -1.82
UBP3Q01477 SHQ1YIL104C 1524 nt3.69□□□□□ -1.82
UBP3Q01477 TFC1YBR123C 1950 nt3.69□□□□□ -1.82 RIP-Chip
UBP3Q01477 PSK1YAL017W 4071 nt3.69□□□□□ -1.82
UBP3Q01477 YPR022CYPR022C 3402 nt3.68□□□□□ -1.82
UBP3Q01477 STE14YDR410C 720 nt3.68□□□□□ -1.82
UBP3Q01477 YER023C-AYER023C-A 213 nt3.68□□□□□ -1.82
UBP3Q01477 RPC10YHR143W-A 213 nt3.68□□□□□ -1.82
UBP3Q01477 PAU14YIL176C 363 nt3.68□□□□□ -1.82
UBP3Q01477 PAU1YJL223C 363 nt3.68□□□□□ -1.82 RIP-Chip
UBP3Q01477 YLR154C-HYLR154C-H 132 nt3.68□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 29.7 ms