Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 DUX4L4-201ENST00000566884 1269 ntBASIC12.96□□□□□ -0.33
RBM3P98179 MIR3648-2-201ENST00000581792 180 ntBASIC12.96□□□□□ -0.33
RBM3P98179 MIR3648-1-201ENST00000615959 180 ntBASIC12.96□□□□□ -0.33
RBM3P98179 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RBM3P98179 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
RBM3P98179 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RBM3P98179 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.96□□□□□ -0.33
RBM3P98179 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
RBM3P98179 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RBM3P98179 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
RBM3P98179 ERF-202ENST00000440177 2032 ntTSL 2 BASIC12.96□□□□□ -0.34
RBM3P98179 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
RBM3P98179 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RBM3P98179 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC12.96□□□□□ -0.34
RBM3P98179 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RBM3P98179 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RBM3P98179 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RBM3P98179 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RBM3P98179 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RBM3P98179 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
RBM3P98179 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
RBM3P98179 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 ZNRF2P2-203ENST00000454624 420 ntBASIC12.95□□□□□ -0.34
RBM3P98179 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC12.95□□□□□ -0.34
RBM3P98179 LSM7-203ENST00000585409 512 ntTSL 2 BASIC12.95□□□□□ -0.34
RBM3P98179 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC12.95□□□□□ -0.34
RBM3P98179 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RBM3P98179 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 AP000974.1-201ENST00000623909 2387 ntBASIC12.95□□□□□ -0.34
RBM3P98179 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC12.95□□□□□ -0.34
RBM3P98179 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC12.95□□□□□ -0.34
RBM3P98179 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC12.95□□□□□ -0.34
RBM3P98179 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RBM3P98179 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC12.95□□□□□ -0.34
RBM3P98179 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.95□□□□□ -0.34
RBM3P98179 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RBM3P98179 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
RBM3P98179 TNXA-203ENST00000507684 2038 ntBASIC12.95□□□□□ -0.34
RBM3P98179 REST-206ENST00000612429 1376 ntTSL 5 BASIC12.94□□□□□ -0.34
RBM3P98179 REST-207ENST00000616975 1370 ntTSL 5 BASIC12.94□□□□□ -0.34
RBM3P98179 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.94□□□□□ -0.34
RBM3P98179 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RBM3P98179 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC12.94□□□□□ -0.34
RBM3P98179 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RBM3P98179 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC12.94□□□□□ -0.34
RBM3P98179 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC12.94□□□□□ -0.34
RBM3P98179 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC12.94□□□□□ -0.34
RBM3P98179 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
RBM3P98179 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC12.94□□□□□ -0.34
RBM3P98179 IDNK-203ENST00000405990 629 ntTSL 2 BASIC12.94□□□□□ -0.34
RBM3P98179 AC133552.2-201ENST00000619106 1032 ntBASIC12.94□□□□□ -0.34
RBM3P98179 AC004408.2-201ENST00000623613 2777 ntBASIC12.94□□□□□ -0.34
RBM3P98179 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC12.94□□□□□ -0.34
RBM3P98179 PLK5-205ENST00000642079 1969 ntBASIC12.94□□□□□ -0.34
RBM3P98179 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RBM3P98179 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RBM3P98179 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RBM3P98179 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC12.93□□□□□ -0.34
RBM3P98179 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
RBM3P98179 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.93□□□□□ -0.34
RBM3P98179 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RBM3P98179 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC12.93□□□□□ -0.34
RBM3P98179 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RBM3P98179 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms