Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 QTRT1-205ENST00000587599 994 ntTSL 315.56■□□□□ 0.088e-11■■■□□ 14.9
LSM11P83369 PAM16-210ENST00000575636 732 ntTSL 315.64■□□□□ 0.094e-6■■■□□ 14.9
LSM11P83369 PAM16-205ENST00000571986 606 ntTSL 315.32■□□□□ 0.044e-6■■■□□ 14.9
LSM11P83369 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.56□□□□□ -0.084e-6■■■□□ 14.9
LSM11P83369 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.164e-6■■■□□ 14.9
LSM11P83369 PAM16-209ENST00000573614 650 ntTSL 513.65□□□□□ -0.224e-6■■■□□ 14.9
LSM11P83369 PAM16-202ENST00000571178 353 ntTSL 312.58□□□□□ -0.44e-6■■■□□ 14.9
LSM11P83369 ACAD11-205ENST00000485198 2940 ntTSL 1 (best)10.32□□□□□ -0.766e-9■■■□□ 14.9
LSM11P83369 DPP7-210ENST00000483783 958 ntTSL 218.88■□□□□ 0.617e-8■■■□□ 14.9
LSM11P83369 VWCE-201ENST00000301770 3368 ntTSL 1 (best)13.95□□□□□ -0.182e-6■■■□□ 14.9
LSM11P83369 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.182e-6■■■□□ 14.9
LSM11P83369 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.63□□□□□ -0.392e-6■■■□□ 14.9
LSM11P83369 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC11.49□□□□□ -0.572e-6■■■□□ 14.9
LSM11P83369 SOAT2-202ENST00000542365 1797 ntTSL 216.51■□□□□ 0.234e-6■■■□□ 14.9
LSM11P83369 SPG7-204ENST00000561911 1025 ntTSL 514.09□□□□□ -0.152e-8■■■□□ 14.9
LSM11P83369 SGSM3-207ENST00000469719 1029 ntTSL 513.74□□□□□ -0.212e-8■■■□□ 14.9
LSM11P83369 SGSM3-202ENST00000417424 666 ntTSL 513.33□□□□□ -0.282e-8■■■□□ 14.9
LSM11P83369 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.362e-8■■■□□ 14.9
LSM11P83369 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC11.66□□□□□ -0.542e-8■■■□□ 14.9
LSM11P83369 SGSM3-213ENST00000485962 2973 ntTSL 511.61□□□□□ -0.552e-8■■■□□ 14.9
LSM11P83369 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.642e-8■■■□□ 14.9
LSM11P83369 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-8■■■□□ 14.9
LSM11P83369 SGSM3-209ENST00000478085 4218 ntTSL 210.8□□□□□ -0.682e-8■■■□□ 14.9
LSM11P83369 AAAS-220ENST00000552876 2016 ntTSL 214.02□□□□□ -0.179e-11■■■□□ 14.8
LSM11P83369 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.59□□□□□ -0.239e-11■■■□□ 14.8
LSM11P83369 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.54□□□□□ -0.49e-11■■■□□ 14.8
LSM11P83369 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.449e-11■■■□□ 14.8
LSM11P83369 AAAS-212ENST00000548931 1075 ntTSL 510.61□□□□□ -0.719e-11■■■□□ 14.8
LSM11P83369 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.41■■□□□ 1.821e-6■■■□□ 14.8
LSM11P83369 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.56■■□□□ 1.681e-6■■■□□ 14.8
LSM11P83369 HAGHL-202ENST00000389701 1295 ntTSL 1 (best)21.32■■□□□ 11e-6■■■□□ 14.8
LSM11P83369 HAGHL-215ENST00000567696 2199 ntTSL 220.36■□□□□ 0.851e-6■■■□□ 14.8
LSM11P83369 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.91■□□□□ 0.781e-6■■■□□ 14.8
LSM11P83369 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.21e-6■■■□□ 14.8
LSM11P83369 HAGHL-210ENST00000563156 572 ntTSL 410.96□□□□□ -0.651e-6■■■□□ 14.8
LSM11P83369 CUX1-220ENST00000607092 559 ntTSL 36.04□□□□□ -1.444e-6■■■□□ 14.8
LSM11P83369 ILF3-220ENST00000590869 531 ntTSL 511.23□□□□□ -0.615e-7■■■□□ 14.8
LSM11P83369 NSUN2-203ENST00000504374 3217 ntTSL 216.26■□□□□ 0.193e-8■■■□□ 14.8
LSM11P83369 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.13e-8■■■□□ 14.8
LSM11P83369 NSUN2-208ENST00000513888 1290 ntTSL 213.13□□□□□ -0.313e-8■■■□□ 14.8
LSM11P83369 NSUN2-205ENST00000505892 3558 ntTSL 1 (best)7.1□□□□□ -1.273e-8■■■□□ 14.8
LSM11P83369 ECHDC2-212ENST00000486170 474 ntTSL 217.81■□□□□ 0.445e-6■■■□□ 14.8
LSM11P83369 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.51■□□□□ 0.877e-8■■■□□ 14.8
LSM11P83369 SNHG12-201ENST00000461448 1629 ntTSL 1 (best)17.5■□□□□ 0.397e-8■■■□□ 14.8
LSM11P83369 SNHG12-206ENST00000474814 1903 ntTSL 216.48■□□□□ 0.237e-8■■■□□ 14.8
LSM11P83369 SNHG12-208ENST00000481220 751 ntTSL 315.77■□□□□ 0.127e-8■■■□□ 14.8
LSM11P83369 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.91□□□□□ -0.347e-8■■■□□ 14.8
LSM11P83369 SNHG12-209ENST00000481368 1588 ntTSL 1 (best)12.56□□□□□ -0.47e-8■■■□□ 14.8
LSM11P83369 SNHG12-205ENST00000470977 1098 ntTSL 1 (best)11.57□□□□□ -0.567e-8■■■□□ 14.8
LSM11P83369 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC8.99□□□□□ -0.977e-8■■■□□ 14.8
LSM11P83369 SNHG12-204ENST00000464612 719 ntTSL 1 (best)8□□□□□ -1.137e-8■■■□□ 14.8
LSM11P83369 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.71□□□□□ -1.187e-8■■■□□ 14.8
LSM11P83369 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.57■■□□□ 1.361e-8■■■□□ 14.8
LSM11P83369 MPP6-206ENST00000432190 982 ntTSL 320.5■□□□□ 0.871e-8■■■□□ 14.8
LSM11P83369 MPP6-205ENST00000430180 1191 ntTSL 516.64■□□□□ 0.251e-8■■■□□ 14.8
LSM11P83369 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.091e-8■■■□□ 14.8
LSM11P83369 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.061e-8■■■□□ 14.8
LSM11P83369 TANK-217ENST00000463502 570 ntTSL 313.8□□□□□ -0.21e-8■■■□□ 14.8
LSM11P83369 TANK-213ENST00000441987 533 ntTSL 513.36□□□□□ -0.271e-8■■■□□ 14.8
LSM11P83369 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.281e-8■■■□□ 14.8
LSM11P83369 TANK-223ENST00000494976 636 ntTSL 313.12□□□□□ -0.311e-8■■■□□ 14.8
LSM11P83369 COPS2-204ENST00000558545 668 ntTSL 212.84□□□□□ -0.351e-8■■■□□ 14.8
LSM11P83369 COPS2-205ENST00000558843 803 ntTSL 1 (best)12.64□□□□□ -0.391e-8■■■□□ 14.8
LSM11P83369 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.451e-8■■■□□ 14.8
LSM11P83369 TANK-206ENST00000406287 875 ntTSL 5 BASIC11.65□□□□□ -0.541e-8■■■□□ 14.8
LSM11P83369 TANK-214ENST00000456358 564 ntTSL 511.54□□□□□ -0.561e-8■■■□□ 14.8
LSM11P83369 TANK-215ENST00000457887 762 ntTSL 511.27□□□□□ -0.611e-8■■■□□ 14.8
LSM11P83369 TANK-207ENST00000429217 762 ntTSL 511.12□□□□□ -0.631e-8■■■□□ 14.8
LSM11P83369 COPS2-208ENST00000561248 575 ntTSL 411.1□□□□□ -0.631e-8■■■□□ 14.8
LSM11P83369 COPS2-201ENST00000299259 2036 ntTSL 1 (best) BASIC9.7□□□□□ -0.861e-8■■■□□ 14.8
LSM11P83369 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC9.55□□□□□ -0.881e-8■■■□□ 14.8
LSM11P83369 TANK-221ENST00000483622 566 ntTSL 59.14□□□□□ -0.951e-8■■■□□ 14.8
LSM11P83369 TANK-220ENST00000477952 427 ntTSL 29.14□□□□□ -0.951e-8■■■□□ 14.8
LSM11P83369 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.31□□□□□ -1.081e-8■■■□□ 14.8
LSM11P83369 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.19□□□□□ -1.11e-8■■■□□ 14.8
LSM11P83369 TANK-212ENST00000440506 550 ntTSL 38.07□□□□□ -1.121e-8■■■□□ 14.8
LSM11P83369 TANK-208ENST00000432002 600 ntTSL 58.04□□□□□ -1.121e-8■■■□□ 14.8
LSM11P83369 TANK-216ENST00000461338 674 ntTSL 37.76□□□□□ -1.171e-8■■■□□ 14.8
LSM11P83369 TANK-209ENST00000432692 576 ntTSL 57.08□□□□□ -1.281e-8■■■□□ 14.8
LSM11P83369 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.761e-8■■■□□ 14.8
LSM11P83369 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.821e-8■■■□□ 14.8
LSM11P83369 GAA-202ENST00000390015 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.672e-6■■■□□ 14.8
LSM11P83369 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.712e-6■■■□□ 14.8
LSM11P83369 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.932e-6■■■□□ 14.8
LSM11P83369 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.462e-6■■■□□ 14.8
LSM11P83369 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.212e-6■■■□□ 14.8
LSM11P83369 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.162e-6■■■□□ 14.8
LSM11P83369 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.482e-6■■■□□ 14.8
LSM11P83369 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.512e-6■■■□□ 14.8
LSM11P83369 MAGED2-204ENST00000375058 2048 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.652e-6■■■□□ 14.8
LSM11P83369 MAGED2-202ENST00000347546 2177 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.692e-6■■■□□ 14.8
LSM11P83369 EML3-207ENST00000460939 1770 ntTSL 521.33■■□□□ 1.013e-7■■■□□ 14.8
LSM11P83369 EML3-206ENST00000439994 671 ntTSL 520.91■□□□□ 0.943e-7■■■□□ 14.8
LSM11P83369 ARHGAP4-224ENST00000494813 1939 ntTSL 520.19■□□□□ 0.826e-17■■■□□ 14.8
LSM11P83369 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.754e-8■■■□□ 14.8
LSM11P83369 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.713e-7■■■□□ 14.8
LSM11P83369 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.636e-17■■■□□ 14.8
LSM11P83369 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.45■□□□□ 0.383e-7■■■□□ 14.8
LSM11P83369 EML3-203ENST00000394776 2818 ntTSL 217.24■□□□□ 0.353e-7■■■□□ 14.8
LSM11P83369 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.94■□□□□ 0.33e-7■■■□□ 14.8
Retrieved 100 of 11,495 protein–RNA pairs in 71.7 ms