Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CKS1BP61024 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS1BP61024 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CKS1BP61024 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CKS1BP61024 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.28□□□□□ -0.12
CKS1BP61024 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.28□□□□□ -0.12
CKS1BP61024 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.28□□□□□ -0.12
CKS1BP61024 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS1BP61024 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CKS1BP61024 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
CKS1BP61024 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CKS1BP61024 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CKS1BP61024 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
CKS1BP61024 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CKS1BP61024 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CKS1BP61024 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CKS1BP61024 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CKS1BP61024 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CKS1BP61024 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CKS1BP61024 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.27□□□□□ -0.12
CKS1BP61024 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
CKS1BP61024 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CKS1BP61024 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CKS1BP61024 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.27□□□□□ -0.12
CKS1BP61024 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CKS1BP61024 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS1BP61024 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.27□□□□□ -0.13
CKS1BP61024 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS1BP61024 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS1BP61024 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS1BP61024 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CKS1BP61024 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS1BP61024 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.27□□□□□ -0.13
CKS1BP61024 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CKS1BP61024 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS1BP61024 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CKS1BP61024 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
CKS1BP61024 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CKS1BP61024 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CKS1BP61024 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.26□□□□□ -0.13
CKS1BP61024 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.26□□□□□ -0.13
CKS1BP61024 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 AC005332.8-201ENST00000622750 2735 ntBASIC14.26□□□□□ -0.13
CKS1BP61024 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.26□□□□□ -0.13
CKS1BP61024 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CKS1BP61024 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 FEM1AP4-201ENST00000443167 1987 ntBASIC14.26□□□□□ -0.13
CKS1BP61024 AC104581.1-202ENST00000635932 2618 ntBASIC14.26□□□□□ -0.13
CKS1BP61024 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CKS1BP61024 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 AC239859.2-201ENST00000444165 318 ntBASIC14.26□□□□□ -0.13
CKS1BP61024 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.26□□□□□ -0.13
CKS1BP61024 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.26□□□□□ -0.13
CKS1BP61024 AC068587.7-201ENST00000641602 218 ntBASIC14.26□□□□□ -0.13
CKS1BP61024 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CKS1BP61024 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.26□□□□□ -0.13
CKS1BP61024 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS1BP61024 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CKS1BP61024 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CKS1BP61024 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CKS1BP61024 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms