Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
AP3S2P59780 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3S2P59780 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S2P59780 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S2P59780 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
AP3S2P59780 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S2P59780 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AP3S2P59780 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3S2P59780 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.6■□□□□ 0.41
AP3S2P59780 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
AP3S2P59780 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 AC021242.3-201ENST00000607598 1377 ntBASIC17.6■□□□□ 0.41
AP3S2P59780 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3S2P59780 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S2P59780 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
AP3S2P59780 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.59■□□□□ 0.41
AP3S2P59780 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
AP3S2P59780 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
AP3S2P59780 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
AP3S2P59780 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 AP006587.3-201ENST00000525742 1516 ntBASIC17.59■□□□□ 0.41
AP3S2P59780 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.59■□□□□ 0.41
AP3S2P59780 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.59■□□□□ 0.41
AP3S2P59780 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
AP3S2P59780 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
AP3S2P59780 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP3S2P59780 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.58■□□□□ 0.41
AP3S2P59780 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.58■□□□□ 0.41
AP3S2P59780 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.58■□□□□ 0.41
AP3S2P59780 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.58■□□□□ 0.4
AP3S2P59780 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.58■□□□□ 0.4
AP3S2P59780 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.58■□□□□ 0.4
AP3S2P59780 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.58■□□□□ 0.4
AP3S2P59780 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
AP3S2P59780 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3S2P59780 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3S2P59780 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP3S2P59780 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP3S2P59780 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
AP3S2P59780 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
AP3S2P59780 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3S2P59780 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3S2P59780 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
AP3S2P59780 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP3S2P59780 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.57■□□□□ 0.4
AP3S2P59780 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3S2P59780 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.57■□□□□ 0.4
AP3S2P59780 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP3S2P59780 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3S2P59780 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP3S2P59780 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.56■□□□□ 0.4
AP3S2P59780 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.56■□□□□ 0.4
AP3S2P59780 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms