Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NR1H2P55055 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NR1H2P55055 AC116562.4-201ENST00000641316 2276 ntBASIC19.35■□□□□ 0.69
NR1H2P55055 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NR1H2P55055 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.35■□□□□ 0.69
NR1H2P55055 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NR1H2P55055 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
NR1H2P55055 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 AC133637.1-201ENST00000624115 1537 ntBASIC19.35■□□□□ 0.69
NR1H2P55055 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NR1H2P55055 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H2P55055 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H2P55055 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H2P55055 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H2P55055 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.34■□□□□ 0.69
NR1H2P55055 AC112907.3-201ENST00000577781 2400 ntBASIC19.34■□□□□ 0.69
NR1H2P55055 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H2P55055 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H2P55055 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.34■□□□□ 0.69
NR1H2P55055 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NR1H2P55055 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NR1H2P55055 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.34■□□□□ 0.69
NR1H2P55055 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.34■□□□□ 0.69
NR1H2P55055 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.34■□□□□ 0.69
NR1H2P55055 AL499627.2-201ENST00000606283 725 ntBASIC19.34■□□□□ 0.69
NR1H2P55055 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H2P55055 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H2P55055 AC027702.1-201ENST00000563810 1770 ntBASIC19.34■□□□□ 0.69
NR1H2P55055 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H2P55055 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H2P55055 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.34■□□□□ 0.69
NR1H2P55055 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NR1H2P55055 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
NR1H2P55055 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.34■□□□□ 0.69
NR1H2P55055 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NR1H2P55055 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NR1H2P55055 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.33■□□□□ 0.69
NR1H2P55055 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.33■□□□□ 0.69
NR1H2P55055 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NR1H2P55055 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NR1H2P55055 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.33■□□□□ 0.69
NR1H2P55055 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H2P55055 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.33■□□□□ 0.68
NR1H2P55055 SLC47A1P1-202ENST00000449666 945 ntBASIC19.33■□□□□ 0.68
NR1H2P55055 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.33■□□□□ 0.68
NR1H2P55055 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H2P55055 AC087623.3-201ENST00000607047 1098 ntBASIC19.33■□□□□ 0.68
NR1H2P55055 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.33■□□□□ 0.68
NR1H2P55055 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.33■□□□□ 0.68
NR1H2P55055 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.33■□□□□ 0.68
NR1H2P55055 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H2P55055 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H2P55055 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H2P55055 AC020907.5-201ENST00000624372 1936 ntBASIC19.33■□□□□ 0.68
NR1H2P55055 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NR1H2P55055 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H2P55055 AP000974.1-201ENST00000623909 2387 ntBASIC19.33■□□□□ 0.68
NR1H2P55055 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H2P55055 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.33■□□□□ 0.68
NR1H2P55055 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.33■□□□□ 0.68
NR1H2P55055 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.32■□□□□ 0.68
NR1H2P55055 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NR1H2P55055 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.32■□□□□ 0.68
NR1H2P55055 DUX4L4-201ENST00000566884 1269 ntBASIC19.32■□□□□ 0.68
NR1H2P55055 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.32■□□□□ 0.68
NR1H2P55055 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NR1H2P55055 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.32■□□□□ 0.68
NR1H2P55055 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 AC004408.2-201ENST00000623613 2777 ntBASIC19.32■□□□□ 0.68
NR1H2P55055 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H2P55055 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H2P55055 TSPY26P-201ENST00000476365 1326 ntBASIC19.31■□□□□ 0.68
NR1H2P55055 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H2P55055 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H2P55055 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms