Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2JP52435 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.62■□□□□ 0.73
POLR2JP52435 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.62■□□□□ 0.73
POLR2JP52435 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.62■□□□□ 0.73
POLR2JP52435 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2JP52435 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2JP52435 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2JP52435 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2JP52435 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
POLR2JP52435 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2JP52435 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.61■□□□□ 0.73
POLR2JP52435 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.61■□□□□ 0.73
POLR2JP52435 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.61■□□□□ 0.73
POLR2JP52435 AC008175.2-201ENST00000612840 297 ntBASIC19.61■□□□□ 0.73
POLR2JP52435 AC131212.1-201ENST00000613771 668 ntBASIC19.61■□□□□ 0.73
POLR2JP52435 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
POLR2JP52435 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2JP52435 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2JP52435 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2JP52435 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2JP52435 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR2JP52435 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2JP52435 POU5F1P4-201ENST00000413175 1085 ntBASIC19.6■□□□□ 0.73
POLR2JP52435 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.6■□□□□ 0.73
POLR2JP52435 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR2JP52435 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR2JP52435 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.6■□□□□ 0.73
POLR2JP52435 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2JP52435 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR2JP52435 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
POLR2JP52435 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
POLR2JP52435 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
POLR2JP52435 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2JP52435 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2JP52435 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2JP52435 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2JP52435 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR2JP52435 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR2JP52435 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR2JP52435 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR2JP52435 AL355001.2-201ENST00000620617 1191 ntBASIC19.59■□□□□ 0.73
POLR2JP52435 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
POLR2JP52435 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2JP52435 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
POLR2JP52435 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.59■□□□□ 0.73
POLR2JP52435 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2JP52435 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2JP52435 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR2JP52435 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR2JP52435 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2JP52435 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
POLR2JP52435 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.58■□□□□ 0.73
POLR2JP52435 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.58■□□□□ 0.72
POLR2JP52435 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR2JP52435 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.58■□□□□ 0.72
POLR2JP52435 TPRG1LP1-201ENST00000598702 760 ntBASIC19.58■□□□□ 0.72
POLR2JP52435 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
POLR2JP52435 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.58■□□□□ 0.72
POLR2JP52435 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
POLR2JP52435 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
POLR2JP52435 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.58■□□□□ 0.72
POLR2JP52435 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR2JP52435 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR2JP52435 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
POLR2JP52435 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
POLR2JP52435 AC008406.3-201ENST00000620001 1374 ntBASIC19.57■□□□□ 0.72
POLR2JP52435 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2JP52435 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2JP52435 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.57■□□□□ 0.72
POLR2JP52435 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2JP52435 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2JP52435 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
POLR2JP52435 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2JP52435 MIR939-201ENST00000401314 82 ntBASIC19.57■□□□□ 0.72
POLR2JP52435 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.57■□□□□ 0.72
POLR2JP52435 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR2JP52435 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR2JP52435 AF213884.3-201ENST00000563833 479 ntBASIC19.57■□□□□ 0.72
POLR2JP52435 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR2JP52435 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR2JP52435 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.57■□□□□ 0.72
POLR2JP52435 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2JP52435 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2JP52435 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2JP52435 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2JP52435 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2JP52435 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms